Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01000026.1
Length=199
Score E
Sequences producing significant alignments: (Bits) Value
seq11737 134 1e-29
seq1447 134 1e-29
seq10921 102 9e-20
>seq11737
Length=277544
Score = 134 bits (148), Expect = 1e-29
Identities = 150/198 (76%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60
||| |||||| ||||||||||||||||| |||||||||||| ||||| ||||| ||
Sbjct 218319 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCAATGCAATCCAAC 218378
Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120
|||| | ||||| | |||||| || | || |||| ||| || ||||| ||
Sbjct 218379 CGCGTTTTTTCAACTTAGCATACATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 218438
Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180
|||||| | |||||||| |||||| ||||||||| || | | || || || ||||||
Sbjct 218439 TCTCGGACTTGGACCTTAGCACCCAAGCCCTCACT-GCCCAGTATATCTTAT-AGCATTC 218496
Query 181 GGAGTTTGGCAGGACTTG 198
|||||||| ||||| |||
Sbjct 218497 GGAGTTTGTCAGGAATTG 218514
>seq1447
Length=1029730
Score = 134 bits (148), Expect = 1e-29
Identities = 150/198 (76%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60
||| |||||| ||||||||||||||||| |||||||||||| ||||| ||||| ||
Sbjct 758054 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCAATGCAATCCAAC 757995
Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120
|||| | ||||| | |||||| || | || |||| ||| || ||||| ||
Sbjct 757994 CGCGTTTTTTCAACTTAGCATACATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 757935
Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180
|||||| | |||||||| |||||| ||||||||| || | | || || || ||||||
Sbjct 757934 TCTCGGACTTGGACCTTAGCACCCAAGCCCTCACT-GCCCAGTATATCTTAT-AGCATTC 757877
Query 181 GGAGTTTGGCAGGACTTG 198
|||||||| ||||| |||
Sbjct 757876 GGAGTTTGTCAGGAATTG 757859
>seq10921
Length=25804
Score = 102 bits (112), Expect = 9e-20
Identities = 140/189 (74%), Gaps = 5/189 (3%)
Strand=Plus/Minus
Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60
||| |||||| |||| || ||||||||| || |||||||| |||||| || ||||||
Sbjct 3409 GCACTCTTTAAATGATTG-CTGCTTCCAAGCAAACATCCTGGCTGTCTCGGCAGTCAGAC 3351
Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120
||| || | | ||||| | |||| | | || ||| || || ||||| ||
Sbjct 3350 TTCCTTTGTTCAACTTAGTATAGATTTGGAGACCTTAGCTGTAGTTCTGGGTTCTTTCCC 3291
Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGC-ATGACTGATGCGCATT 179
|||||| | ||||||||| ||||| ||||||||| || |||| || || || ||||||
Sbjct 3290 TCTCGGACCCGGACCTTAGCACCCGAGCCCTCACT-GC-CGGCTATATCTTAT-CGCATT 3234
Query 180 CGGAGTTTG 188
|||||||||
Sbjct 3233 CGGAGTTTG 3225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 537506256000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |