Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq10921 325 8e-87 seq11737 322 9e-86 seq1447 322 9e-86 seq13487 170 4e-40 seq1 147 4e-33 seq14174 127 4e-27 >seq10921 Length=25804 Score = 325 bits (360), Expect = 8e-87 Identities = 267/322 (83%), Gaps = 2/322 (1%) Strand=Plus/Plus Query 15 GGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGTGA 74 |||||||| ||| |||||| ||| ||||||||||||||||||||| | ||| ||||| Sbjct 2809 GGGTGAAAAAGAACCTGAAACCGTACGCCTACAAGCGGTCGGAGCCATGCGATATGGTGA 2868 Query 75 CGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCTT 134 |||||||||||||||||||||| ||||||||||| ||||| |||||||||||| || Sbjct 2869 CGGCGTGCCTTTTGCATAATGATCCTACGAGTTACG-GTCACAAGCGAGGTTAAGATTTT 2927 Query 135 CAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGA 194 ||| || |||||||| ||||||||| || || |||||| |||| ||||| |||| Sbjct 2928 CAGAATCGG-AGCCGAAGCGAAAGCGAGTCTGAATAGGGCGTTAAGTTTGTGGCTGTAGA 2986 Query 195 CGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGA 254 |||||||||| |||||||||||| | |||||||||| ||||| | ||||||| Sbjct 2987 CGCGAAACCTAGTGATCTACCCATGGTCAGGTTGAAGGTTGGGTAAGACCAACTGGAGGA 3046 Query 255 CCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAAT 314 ||| ||||||| |||||||||||| ||||||||| | ||||||||||||||||| ||| Sbjct 3047 CCGTACCGGTATACGTTGAAAAGTGTTCGGATGAACTGTGGGTAGGGGTGAAAGGCTAAT 3106 Query 315 CAAACTGGGAAATAGCTCGTAC 336 |||||||||||||||||||||| Sbjct 3107 CAAACTGGGAAATAGCTCGTAC 3128 >seq11737 Length=277544 Score = 322 bits (356), Expect = 9e-86 Identities = 270/326 (83%), Gaps = 9/326 (3%) Strand=Plus/Minus Query 15 GGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGA---GTGATTCGG 71 |||||||| ||| |||||| ||| |||||||||||||||||||| ||||| | Sbjct 218921 GGGTGAAAGAGAACCTGAAACCGTACGCCTACAAGCGGTCGGAGCATCTTCGTGAT---G 218865 Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131 ||||||||||||||||||||||||||||||||||||| || || | ||||||||||||| Sbjct 218864 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAATC-TCCCTAGCGAGGTTAAGGT 218806 Query 132 CTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCGC 190 ||||| ||| ||||| || ||||||||| || || ||||||| |||| |||| Sbjct 218805 GTTCAGCACCGG-AGCCGTAGCGAAAGCGAGTCTGAATAGGGCGAAATAGTTAGTGGGAT 218747 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||||||||||| ||||||||||||| | ||||||||||| | |||||| | ||| Sbjct 218746 TAGACGCGAAACCGTGTGATCTACCCATGGGCAGGTTGAAGCTGTGGTAACACACAGTGG 218687 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||||||||||| || |||||||||||| || ||||||| | ||||||||||||||||| Sbjct 218686 AGGACCGAACCAGTTGACGTTGAAAAGTCTTTGGATGACCTGTGGGTAGGGGTGAAAGGC 218627 Query 311 CAATCAAACTGGGAAATAGCTCGTAC 336 |||||||||| ||||||||||||||| Sbjct 218626 CAATCAAACTCGGAAATAGCTCGTAC 218601 >seq1447 Length=1029730 Score = 322 bits (356), Expect = 9e-86 Identities = 270/326 (83%), Gaps = 9/326 (3%) Strand=Plus/Plus Query 15 GGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGA---GTGATTCGG 71 |||||||| ||| |||||| ||| |||||||||||||||||||| ||||| | Sbjct 757452 GGGTGAAAGAGAACCTGAAACCGTACGCCTACAAGCGGTCGGAGCATCTTCGTGAT---G 757508 Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131 ||||||||||||||||||||||||||||||||||||| || || | ||||||||||||| Sbjct 757509 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAATC-TCCCTAGCGAGGTTAAGGT 757567 Query 132 CTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCGC 190 ||||| ||| ||||| || ||||||||| || || ||||||| |||| |||| Sbjct 757568 GTTCAGCACCGG-AGCCGTAGCGAAAGCGAGTCTGAATAGGGCGAAATAGTTAGTGGGAT 757626 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||||||||||| ||||||||||||| | ||||||||||| | |||||| | ||| Sbjct 757627 TAGACGCGAAACCGTGTGATCTACCCATGGGCAGGTTGAAGCTGTGGTAACACACAGTGG 757686 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||||||||||| || |||||||||||| || ||||||| | ||||||||||||||||| Sbjct 757687 AGGACCGAACCAGTTGACGTTGAAAAGTCTTTGGATGACCTGTGGGTAGGGGTGAAAGGC 757746 Query 311 CAATCAAACTGGGAAATAGCTCGTAC 336 |||||||||| ||||||||||||||| Sbjct 757747 CAATCAAACTCGGAAATAGCTCGTAC 757772 >seq13487 Length=4875 Score = 170 bits (188), Expect = 4e-40 Identities = 233/324 (72%), Gaps = 6/324 (2%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| ||| | || ||||| | ||||||||| | || | Sbjct 1395 AGGGGAGTGAAATAGATCCTGAAACCGTGTGCATACAAACAGTCGGAGCCTCTTTATGGG 1454 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||||||||| ||||||| |||||| | | ||| ||| ||| || || |||| Sbjct 1455 GTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTACAT-TCAGTGGCAAGCTTAACC 1513 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | || || || || ||||||||| | || |||||| | ||| | ||| Sbjct 1514 GAGTAGGGA-----AGGCGTAGCGAAAGCGAGTCCGAATAGGGCGTCTAGTCGCTGGGTG 1568 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| ||||||| ||| | |||||||||| |||||| | ||| Sbjct 1569 TAGACCCGAAACCAGATGATCTATCCATGGCCAGGTTGAAGGTTGGGTAACACCAACTGG 1628 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||||||||||| |||||||||||||| |||||| | || |||||||||||||| Sbjct 1629 AGGACCGAACCCACTAACGTTGAAAAGTTAGGGGATGAGCTGTGGATAGGGGTGAAAGGC 1688 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 || |||| |||||||||| || Sbjct 1689 TAAACAAATCTGGAAATAGCTGGT 1712 >seq1 Length=2207822 Score = 147 bits (162), Expect = 4e-33 Identities = 228/324 (70%), Gaps = 9/324 (3%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| |||| || ||||| || |||||| || | Sbjct 517317 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAAAAGTAGGAGCCC---GAAAGG 517373 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| ||| || || |||| Sbjct 517374 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTACAT-TCAGTGGCAAGCTTAACC 517432 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | || || ||||| |||| |||| | || |||||| | ||| | ||| Sbjct 517433 GAATAGGGA-----AGGCGAAGGGAAACCGAGTCCGAATAGGGCGTCTAGTCGCTGGGTG 517487 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| |||||||| ||| | |||| ||||| |||||||| || ||| Sbjct 517488 TAGACCCGAAACCAGGTGATCTATCCATGGCCAGGATGAAGGTGCGGTAACACGCACTGG 517547 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||| |||||||| | |||| ||| | ||||||| | || |||||||||||||| Sbjct 517548 AGGTCCGAACCGACTAGTGTTGCAAAACTAGCGGATGAGCTGTGGATAGGGGTGAAAGGC 517607 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 || ||||| ||| |||||| || Sbjct 517608 TAAACAAACCTGGAGATAGCTGGT 517631 >seq14174 Length=3265 Score = 127 bits (140), Expect = 4e-27 Identities = 227/325 (70%), Gaps = 6/325 (2%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC-GAGTGATTC 69 ||||| |||||||||| | |||| || || ||||||| |||||||| || | | Sbjct 425 AGGGGAGTGAAATAGAACATGAAACCATCAGCTTACAAGCAATCGGAGCCCGATTAAACG 484 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||||||| |||||| ||| | |||||||| ||| ||| | | ||| | |||||||| Sbjct 485 GGTGACGGTGTGCCTGTTGAAGAATGAGCCGGCGACTTA-TAGGCACTGGT-AGGTTAAG 542 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 | | | |||| ||| ||||||||| || || ||||||| | | ||| Sbjct 543 ACGAGAATGTCGA--AGCCAAAGCGAAAGCGAGTCTGAATAGGGCGATAA-TCAGTGTTT 599 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| |||| || |||||||| ||| | |||| ||||| ||||| || Sbjct 600 ATAGACCCGAACCCCGGTGATCTAACCATGTCCAGGATGAAGCTTGAGTAACATTAAGTG 659 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| |||||||| | |||||||| | ||||||| | || ||||||||||| | Sbjct 660 GAGGTCCGAACCGACCGATGTTGAAAAATCGGCGGATGAGGTGTGGTTAGGGGTGAAATG 719 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 |||||| ||| |||| ||||| || Sbjct 720 CCAATCGAACCGGGAGCTAGCTGGT 744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972624896000