Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq13487 129 4e-28 seq1 114 9e-24 >seq13487 Length=4875 Score = 129 bits (142), Expect = 4e-28 Identities = 103/124 (83%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| ||||||||||||||||||||||| | ||||| | || || Sbjct 128 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCCTACCGTGGTGACCGTCC 69 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| ||||| ||| | |||||| | ||||||||||||||||||||||||||||| Sbjct 68 TCCTTGCGGTTAGACTAGCCACTTCTGGTAGAACCCACTCCCATGGTGTGACGGGCGGTG 9 Query 135 TGTA 138 |||| Sbjct 8 TGTA 5 >seq1 Length=2207822 Score = 114 bits (126), Expect = 9e-24 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| ||||||||||||||||| ||| | ||||||| ||||| || Sbjct 516096 TACGGCTACCTTGTTACGACTTCACCCCAGTCACGAACCCTGCCGTGGTAATCGCCCCCC 516037 Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137 ||||| |||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct 516036 TTGCGGTTAGGCTAACTACTTCTGGCAGAACCCGCTCCCATGGTGTGACGGGCGGTGTGT 515977 Query 138 A 138 | Sbjct 515976 A 515976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345541680000