Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq11482 259 9e-67
>seq11482
Length=289922
Score = 259 bits (286), Expect = 9e-67
Identities = 231/282 (82%), Gaps = 8/282 (3%)
Strand=Plus/Plus
Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGC-CAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
||||||| | |||||||| | ||| | ||||||||||| ||| ||||| |||||||
Sbjct 12461 TGCCCTTAATTGGGTGTGT-GTAGAGTTCGGGACTTTTACTGTGAGAAAATCGGAGTGTT 12519
Query 99 CAAAGCAGGCCTTTGCTCGAATACATT--AGCATGGAATAATAGAATAGGACGTGCGGTT 156
|||||||||| | |||| ||| | || ||||||||||||| |||||||| || |
Sbjct 12520 CAAAGCAGGCTTATGCTTGAA--CGTTGCAGCATGGAATAATGGAATAGGATCA-CGATC 12576
Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216
||||||||||||||||| | || |||||||||||||||||||| ||||| | | |
Sbjct 12577 TTATTTTGTTGGTTTCTAAGGTCGAGATAATGATTAATAGGGATAGTTGGGGGCATTAAT 12636
Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276
||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||| ||
Sbjct 12637 ATTTAATTGTCAGAGGTGAAATTCTTGGATTTATGAAAGATTAACTTCTGCGAAAGCATT 12696
Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|||||||||||||| ||||||| ||||||||||||||||
Sbjct 12697 TGCCAAGGATGTTTTCGTTAATCA-AGAACGAAAGTTAGGGG 12737
Score = 158 bits (174), Expect = 2e-36
Identities = 189/250 (76%), Gaps = 5/250 (2%)
Strand=Plus/Plus
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||| || |||||||||| |||||||||||| | ||||||||| | || ||| ||
Sbjct 2896 GCCAGAACGTTTACTTTGAGAAAATTAGAGTGCTAAAAGCAGGCTCTCGCCTATATATAT 2955
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG- 183
| |||||||||||| |||| || | || || ||||| |||||||| ||| | |
Sbjct 2956 T-GCATGGAATAATGAAATAAGATCT-CGATTTTATTTCGTTGGTTT-TAGAAATTGAGA 3012
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||||| || ||||| || ||| | ||| ||||||||||||||||
Sbjct 3013 TAATGATTAATAGGATCAGAGGGGGGCGTACGTACTGTGGTGTGAGAGGTGAAATTCTTG 3072
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
||| | ||| ||| | ||||| |||||| ||||| |||||||||||||||| |
Sbjct 3073 GATCGCCACAGGACGAACAGCAGCGAAGGCGTTCGCCAAGAATGTTTTCATTAATCA-AG 3131
Query 304 AACGAAAGTT 313
||||||||||
Sbjct 3132 AACGAAAGTT 3141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915035264000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |