Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq11482 118 4e-24
seq5180 114 5e-23
seq9262 102 3e-19
seq17213 91.5 6e-16
seq9343 84.2 9e-14
>seq11482
Length=289922
Score = 118 bits (130), Expect = 4e-24
Identities = 109/136 (80%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACT--ATGCCTGAATAGGGTGAA 607
|||||||| ||| || |||||||||||||||||||| ||| || ||| ||||
Sbjct 5711 AGTAAGAGTATATGCAATGAGACCCGAAAGATGGTGAACTTAATG--TGTGTAGAATGAA 5768
Query 608 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667
||||| |||||| |||||||| | ||| |||||||||| ||||||||||||||||||||
Sbjct 5769 GCCAGGGGAAACCCTGGTGGAAGTTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAAC 5828
Query 668 TTGGGTATAGGGGCGA 683
|| | ||||||||
Sbjct 5829 ATGCATTAAGGGGCGA 5844
Score = 109 bits (120), Expect = 2e-21
Identities = 112/145 (77%), Gaps = 1/145 (1%)
Strand=Plus/Plus
Query 39 CGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA-TGGGAGGTAAATTTCTTCTAAAGCTAA 97
||||| | || ||||| || ||| | | || ||||| ||||| || ||| ||||||||
Sbjct 4953 CGAGTAGCGTAGTTTGAGATTGCTACGCCAACGTGGGACGTAAACTTGTTCCAAAGCTAA 5012
Query 98 ATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGG 157
|||| ||||||||||||| ||||||| |||| ||||| ||||||||||| ||
Sbjct 5013 ATATCATAACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGA 5072
Query 158 AAAGAGAGTTAAAAAGCACGTGAAA 182
| ||||||||||| || |||| |||
Sbjct 5073 AGAGAGAGTTAAATAGTACGTAAAA 5097
>seq5180
Length=100460
Score = 114 bits (126), Expect = 5e-23
Identities = 96/116 (83%), Gaps = 4/116 (3%)
Strand=Plus/Minus
Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629
|||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct 60894 GACCCGAAAGATAGTGAACTATGCCTGGCGAGGGTGAAGCCCCAGGAAACTGGGGTGGAG 60835
Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGAT--CGTCAAATTTGGGTATAGGGGCGA 683
|| || ||| ||| || |||||||||| || |||| | ||||| ||||||||||
Sbjct 60834 GCCCGTAGCCGTTGTGACGTGCAAATCCATGGCGTC--AGTTGGGCATAGGGGCGA 60781
>seq9262
Length=60696
Score = 102 bits (112), Expect = 3e-19
Identities = 91/112 (81%), Gaps = 4/112 (4%)
Strand=Plus/Minus
Query 574 CGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTC 633
|||||||| |||||||||||||| ||||||||||| |||||||| |||| |||| |
Sbjct 10562 CGAAAGATAGTGAACTATGCCTGGCGAGGGTGAAGCCCCAGGAAACTGGGGTGTAGGCCC 10503
Query 634 GCAGCGGTTCTGGCGTGCAAATCGAT--CGTCAAATTTGGGTATAGGGGCGA 683
| ||| ||| || |||||||||| || |||| | ||||| ||||||||||
Sbjct 10502 GTAGCCGTTGTGACGTGCAAATCCATGGCGTC--AGTTGGGCATAGGGGCGA 10453
>seq17213
Length=151290
Score = 91.5 bits (100), Expect = 6e-16
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629
||||||||| || || ||||||||||| ||||||||||| |||||||| |||||||
Sbjct 48041 GACCCGAAACATAGTAAACTATGCCTGGCGAGGGTGAAGCCCCAGGAAACTGGGGTGGAG 47982
Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659
|| || ||| ||| || |||||||||| ||
Sbjct 47981 GCCCGTAGCCGTTGTGACGTGCAAATCCAT 47952
>seq9343
Length=57822
Score = 84.2 bits (92), Expect = 9e-14
Identities = 75/93 (81%), Gaps = 2/93 (2%)
Strand=Plus/Minus
Query 574 CGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTC 633
|||||||| |||||||||||||| ||||||||||| |||||||| |||| |||| |
Sbjct 12381 CGAAAGATAGTGAACTATGCCTGGCGAGGGTGAAGCCCCAGGAAACTGGGGTGTAGGCCC 12322
Query 634 GCAGCGGTTCTGGCGTGCAAATCGAT--CGTCA 664
| ||| ||| || ||||||||| || |||||
Sbjct 12321 GTAGCCGTTGTGATGTGCAAATCCATGGCGTCA 12289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079613900000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |