Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq11737 158 1e-36
seq10921 158 1e-36
seq1447 158 1e-36
seq14174 95.1 1e-17
seq13487 84.2 2e-14
seq1 75.2 1e-11
>seq11737
Length=277544
Score = 158 bits (174), Expect = 1e-36
Identities = 141/175 (81%), Gaps = 5/175 (3%)
Strand=Plus/Minus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
|| |||| |||||| ||||||| | || | |||||| ||| |||||||||| || ||
Sbjct 217870 CGTAAACCGACACAGGTAGTCGAGGCGAGAAGCCTAAGGTGCTCGAGTGAATCATGGCTA 217811
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
|||||||||||||| | |||||||||||||||||||||||| | | ||| ||| |
Sbjct 217810 AGGAACTAGGCAAATTAACCCTGTAACTTCGGGATAAAGGGAGC---CACAGCAAT--GT 217756
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||||||| || |||||| ||||||||||||||||||| |||| ||| ||
Sbjct 217755 GGCCGCAGAGAAATGGCCCAGGCGACTGTTTAACAAAAACACATGGCTATGCGAA 217701
>seq10921
Length=25804
Score = 158 bits (174), Expect = 1e-36
Identities = 141/175 (81%), Gaps = 5/175 (3%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
|| |||| |||||| ||||||| | || | |||||| ||| |||||||||| || ||
Sbjct 3858 CGTAAACCGACACAGGTAGTCGAGGCGAGAAGCCTAAGGTGCTCGAGTGAATCATGGCTA 3917
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
|||||||||||||| | |||||||||||||||||||||||| | | ||| ||| |
Sbjct 3918 AGGAACTAGGCAAATTAACCCTGTAACTTCGGGATAAAGGGAGC---CACAGCAAT--GT 3972
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||||||| || |||||| ||||||||||||||||||| |||| ||| ||
Sbjct 3973 GGCCGCAGAGAAATGGCCCAGGCGACTGTTTAACAAAAACACATGGCTATGCGAA 4027
>seq1447
Length=1029730
Score = 158 bits (174), Expect = 1e-36
Identities = 141/175 (81%), Gaps = 5/175 (3%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
|| |||| |||||| ||||||| | || | |||||| ||| |||||||||| || ||
Sbjct 758503 CGTAAACCGACACAGGTAGTCGAGGCGAGAAGCCTAAGGTGCTCGAGTGAATCATGGCTA 758562
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
|||||||||||||| | |||||||||||||||||||||||| | | ||| ||| |
Sbjct 758563 AGGAACTAGGCAAATTAACCCTGTAACTTCGGGATAAAGGGAGC---CACAGCAAT--GT 758617
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||||||| || |||||| ||||||||||||||||||| |||| ||| ||
Sbjct 758618 GGCCGCAGAGAAATGGCCCAGGCGACTGTTTAACAAAAACACATGGCTATGCGAA 758672
>seq14174
Length=3265
Score = 95.1 bits (104), Expect = 1e-17
Identities = 123/166 (74%), Gaps = 7/166 (4%)
Strand=Plus/Plus
Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83
|||| |||||| || | |||||| | ||||||| || ||| || | | | ||||
Sbjct 1532 AAACCGACACAGGTGGGATGGTTGAGAAAACTAAGGGGCGCGAGATAA-CTCTCTCTAAG 1590
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143
||||| |||||| || ||| |||||||||| | || |||| || | | ||| |||
Sbjct 1591 GAACTCGGCAAAATGGCCCCGTAACTTCGGAAGAAGGGGTGCC-AGCGAGAGCTGGT--- 1646
Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
||||| ||| || ||||||| |||||||| |||||||||||| ||
Sbjct 1647 -CGCAGTGAAGAGATCCAGGCGACTGTTTACCAAAAACACAGGTCT 1691
>seq13487
Length=4875
Score = 84.2 bits (92), Expect = 2e-14
Identities = 79/98 (81%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80
||||||| |||||| || | |||| ||| ||| |||||||||||||| ||| ||| ||
Sbjct 2548 CGCAAACCGACACAGGTGGGCGGGATGAGTATTCTAAGGCGCTTGAGAGAACTCA-GGAG 2606
Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118
|||||||| |||||| || | |||||||||||| ||
Sbjct 2607 AAGGAACTCGGCAAATTGGTACCGTAACTTCGGGAGAA 2644
>seq1
Length=2207822
Score = 75.2 bits (82), Expect = 1e-11
Identities = 80/106 (75%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
||||||| ||||| || || | ||| ||| |||||||||||||| ||| || |
Sbjct 518420 CGCAAACCGACACTGGTGCGCGAGATGAGTATTCTAAGGCGCTTGAGAGAACTCTGGAGA 518479
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCT 127
||||||| |||||| |||| | |||||||||| | || | || |||
Sbjct 518480 AGGAACTCGGCAAATTGACACCGTAACTTCGGAAGAAGGTGTGCCT 518525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531107372000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |