Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1 152 5e-35 seq13487 143 3e-32 seq14174 82.4 7e-14 seq11737 77.0 3e-12 seq10921 77.0 3e-12 seq1447 77.0 3e-12 >seq1 Length=2207822 Score = 152 bits (168), Expect = 5e-35 Identities = 90/94 (96%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 518580 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAAGACGAAAGTCGACGTATAGGGTG 518639 Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||||||| ||||| |||||||||| Sbjct 518640 TGACGCCTGCCCGGTGCTGGAAGATTAATTGATG 518673 >seq13487 Length=4875 Score = 143 bits (158), Expect = 3e-32 Identities = 88/94 (94%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124 |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| | Sbjct 2707 GCTGCGACTGTTTAATAAAAACACAGCTCTCTGCAAACACGAAAGTGGACGTATAGGGAG 2766 Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||||||| ||||| |||| ||||| Sbjct 2767 TGACGCCTGCCCGGTGCTGGAAGATTAAATGATG 2800 >seq14174 Length=3265 Score = 82.4 bits (90), Expect = 7e-14 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| |||||||||| ||| || || || ||| || |||| ||| ||| Sbjct 1665 GCGACTGTTTACCAAAAACACAGGTCTCCGCTAAGTCGCAAGACGATGTATGGGGGCTGA 1724 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||| ||||||||||||||| Sbjct 1725 CGCCTGCCCAGTGCCGGAAGGTTAA 1749 >seq11737 Length=277544 Score = 77.0 bits (84), Expect = 3e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||| || ||| || | || || |||||||| || ||| Sbjct 217734 GCGACTGTTTAACAAAAACACATGGCTATGCGAAGATTAATGTCGACGTATATGGCCTGA 217675 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||||||||| Sbjct 217674 CACCTGCCCGGTGCTGGAAGGTTAA 217650 >seq10921 Length=25804 Score = 77.0 bits (84), Expect = 3e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||| || ||| || | || || |||||||| || ||| Sbjct 3994 GCGACTGTTTAACAAAAACACATGGCTATGCGAAGATTAATGTCGACGTATATGGCCTGA 4053 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||||||||| Sbjct 4054 CACCTGCCCGGTGCTGGAAGGTTAA 4078 >seq1447 Length=1029730 Score = 77.0 bits (84), Expect = 3e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||| || ||| || | || || |||||||| || ||| Sbjct 758639 GCGACTGTTTAACAAAAACACATGGCTATGCGAAGATTAATGTCGACGTATATGGCCTGA 758698 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||||||||| Sbjct 758699 CACCTGCCCGGTGCTGGAAGGTTAA 758723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476716858000