Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq1 439 6e-121
seq13487 403 5e-110
seq11737 266 8e-69
seq1447 266 8e-69
seq14174 262 1e-67
seq10921 253 5e-65
>seq1
Length=2207822
Score = 439 bits (486), Expect = 6e-121
Identities = 348/416 (84%), Gaps = 10/416 (2%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| | | |||||| ||||| ||||||| ||| ||||||||| || ||||||||
Sbjct 518852 CGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGAGTCTCTGGAGGAGACAGT 518793
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 518792 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 518733
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| |||||||||||||||||| ||| |||||||||||||||| ||
Sbjct 518732 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCGATCAAGAGCTT-GC---- 518678
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
|||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||
Sbjct 518677 ----ACCCCATCAATTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCGACTT 518622
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300
|||| ||||||||||||||||||||||||||||||||||||| || | ||| || ||
Sbjct 518621 TCGTCTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCCACCGATTCTCTGCGGCC 518562
Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTC-ACCGGCGCACCTTCTCCCGAAGTTAC 359
|| ||| | || || | |||||| | | ||| |||||||| ||||||||||
Sbjct 518561 TCATTGGGCTCCCCAAGTAAATGGTTCACCTACTAAAGGCACACCTTCTTCCGAAGTTAC 518502
Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415
|||| | |||||| ||||||||| || ||||||||||||||||||| | || |||
Sbjct 518501 GGTGTCAATTTGCCGAGTTCCTTCTCCAGAGTTCTCTCAAGCGCCTTAGAATACTC 518446
>seq13487
Length=4875
Score = 403 bits (446), Expect = 5e-110
Identities = 351/430 (82%), Gaps = 17/430 (4%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| | | |||||| ||||| | ||||| ||| ||||||||| || ||||||||
Sbjct 2979 CGCGGGGAGATTGCATCATCACAAACACTTCAACTTCGCTGAGTCTCAGGAGGAGACAGT 2920
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2919 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 2860
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| |||||||||||||||||| ||| |||| ||||||||||| ||
Sbjct 2859 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAATCAAGAGCTT-GC---- 2805
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||
Sbjct 2804 ----ACCCCATCATTTAATCTTCCAGCACCGGGCAGGCGTCACTCCCTATACGTCCACTT 2749
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCC-TGGTATCTTCGAC 299
|||||||||||||| |||||||||||| |||||||||||||| || | ||| | | ||
Sbjct 2748 TCGTGTTTGCAGAGAGCTGTGTTTTTATTAAACAGTCGCAGCCACCATTTTAT-TGCAAC 2690
Query 300 CGGCATGAGCTT--ACGGAGCAAGTCCTTCACCCT-CACCGGCGCACCTTCTCCCGAAGT 356
| | ||| || | || | ||| || || |||| |||||||||||||||
Sbjct 2689 CCCTTCGTCCTTCCACTGTTCATG---GTCAAACTACAAGGGCGTACCTTCTCCCGAAGT 2633
Query 357 TACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416
|||||| || |||||| ||||||||| || ||||||||||||||||||| | || |||
Sbjct 2632 TACGGTACCAATTTGCCGAGTTCCTTCTCCTGAGTTCTCTCAAGCGCCTTAGAATACTCA 2573
Query 417 ACCCAACCAC 426
||| ||||
Sbjct 2572 TCCCGCCCAC 2563
>seq11737
Length=277544
Score = 266 bits (294), Expect = 8e-69
Identities = 228/279 (82%), Gaps = 2/279 (1%)
Strand=Plus/Plus
Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGC 60
|||| || | |||||||||| | | | ||||||||| ||| ||| ||| |||||||
Sbjct 217457 GCGGGTAACCGGCATCTTCACCGATACTACAATTTCACCGAG-CTCATGGTTGAGACAGT 217515
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 217516 GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 217575
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| |||||||||||||||||| |||||||| |||| |||||| | |
Sbjct 217576 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTCAAAAGCTTCTCCGAA 217635
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
| |||| | || |||||||||| |||||||||||| |||| || |||||||| || |
Sbjct 217636 GATAACTTCCTCCCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCATATACGTCGACAT 217695
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279
| | || ||| || ||||||||| |||||||||||
Sbjct 217696 TAATCTTCGCATAGCCATGTGTTTTTGTTAAACAGTCGC 217734
>seq1447
Length=1029730
Score = 266 bits (294), Expect = 8e-69
Identities = 228/279 (82%), Gaps = 2/279 (1%)
Strand=Plus/Minus
Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGC 60
|||| || | |||||||||| | | | ||||||||| ||| ||| ||| |||||||
Sbjct 758916 GCGGGTAACCGGCATCTTCACCGATACTACAATTTCACCGAG-CTCATGGTTGAGACAGT 758858
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 758857 GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 758798
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| |||||||||||||||||| |||||||| |||| |||||| | |
Sbjct 758797 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTCAAAAGCTTCTCCGAA 758738
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
| |||| | || |||||||||| |||||||||||| |||| || |||||||| || |
Sbjct 758737 GATAACTTCCTCCCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCATATACGTCGACAT 758678
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279
| | || ||| || ||||||||| |||||||||||
Sbjct 758677 TAATCTTCGCATAGCCATGTGTTTTTGTTAAACAGTCGC 758639
>seq14174
Length=3265
Score = 262 bits (290), Expect = 1e-67
Identities = 300/406 (74%), Gaps = 28/406 (7%)
Strand=Plus/Minus
Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74
|||||||||| | | | ||||| | ||| ||| |||||||| | ||||||||
Sbjct 1929 ATCTTCACAGACAATCCTATTTCGCCGAGCCTCTCTCCGAGACAGCATCCAGATCGTTAC 1870
Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134
||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1869 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 1810
Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAA 194
||||||||||||||| |||||||||||| || |||||||| | ||| ||| |
Sbjct 1809 GTTACGGCCGCCGTTCACCGGGGCTTCGGTCGTCAGCTTCGCTTGCGCTGACCAACTTCC 1750
Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254
||||||||||||||| |||||||||||| ||| |||| || ||| || || || |||
Sbjct 1749 TTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATCGTCTTGCGACTTAGCGGAG 1690
Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGG-TATCTTCGACCGGCATGAGCTTAC 313
|||||||||| ||||||||| |||||| | ||||| || | | ||||
Sbjct 1689 ACCTGTGTTTTTGGTAAACAGTC------GCCTGGATCTCTTC-ACTGCGACCAGCT--- 1640
Query 314 GGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCC 373
||| | ||| | |||||| |||||||||||| ||| |||||||
Sbjct 1639 -----------------CTCGCTGGCACCCCTTCTTCCGAAGTTACGGGGCCATTTTGCC 1597
Query 374 TAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419
|||||||| ||||| |||| || |||| || ||||| |||
Sbjct 1596 GAGTTCCTTAGAGAGAGTTATCTCGCGCCCCTTAGTTTTCTCAACC 1551
>seq10921
Length=25804
Score = 253 bits (280), Expect = 5e-65
Identities = 225/279 (81%), Gaps = 2/279 (1%)
Strand=Plus/Minus
Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAG-TCTCGGGTGGAGACAGC 60
|||| || || |||||||||| | | | ||||||| | ||| || ||| || ||||||
Sbjct 4271 GCGGGTAGACGGCATCTTCACCGTCACTACAATTTCGCCGAGCTCACGGCTG-AGACAGT 4213
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4212 GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 4153
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| |||||||||||||||||| ||||||||| | | ||||| | |
Sbjct 4152 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGGTTCAATGCTTCTCTTGC 4093
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
| | || | || |||||||||| |||||||||||| |||| || |||||||| || |
Sbjct 4092 GATGACTTCCTCTCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCATATACGTCGACAT 4033
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279
| | || ||| || ||||||||| |||||||||||
Sbjct 4032 TAATCTTCGCATAGCCATGTGTTTTTGTTAAACAGTCGC 3994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260573056000
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