Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq5180 86.0 3e-15 seq11482 80.6 1e-13 seq5969 77.0 1e-12 seq9343 73.4 2e-11 >seq5180 Length=100460 Score = 86.0 bits (94), Expect = 3e-15 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||| ||| ||||||||||||||| ||||| |||||||||| |||||||||| Sbjct 62580 GGAAAAGAAACCAACAGGGATTCCCTCAGTAAGGGCGACTGAACAGGGATGAGCCCAGCG 62521 Query 61 CCGAA 65 | ||| Sbjct 62520 CAGAA 62516 >seq11482 Length=289922 Score = 80.6 bits (88), Expect = 1e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| || Sbjct 14176 GGAAAAGAAACTAACAAGGATTCCCCCAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 14232 >seq5969 Length=90458 Score = 77.0 bits (84), Expect = 1e-12 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||| |||| ||| |||||||||| | ||| ||||| |||||| |||||||||||||| Sbjct 70791 GGAAAAAAAACCAACAAGGATTCCCTTAATAAAGGCGACTGAACATGGAAGAGCCCAGCG 70850 Query 61 CCGAA 65 | ||| Sbjct 70851 CAGAA 70855 >seq9343 Length=57822 Score = 73.4 bits (80), Expect = 2e-11 Identities = 55/65 (85%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||| ||| | |||| || ||||| ||||| |||||| |||||||||||||| Sbjct 15854 GGAAAAGAAACCAACAGGAATTCACTTAGTAAGGGCGAATGAACAAGGAAGAGCCCAGCG 15795 Query 61 CCGAA 65 | ||| Sbjct 15794 CAGAA 15790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230361120000