Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq14174 369 8e-100 seq10921 334 2e-89 seq11737 333 6e-89 seq1447 333 6e-89 seq1 246 6e-63 seq13487 215 1e-53 >seq14174 Length=3265 Score = 369 bits (408), Expect = 8e-100 Identities = 289/344 (84%), Gaps = 1/344 (0%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||||||| | | | | ||||| ||||| || | ||||||| ||| |||||||| Sbjct 1929 ATCTTCACAGACAATCCTATTTCGCCGAGCCTCTCTCCGAGACAGCATCCAGATCGTTAC 1870 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1869 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 1810 Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCC 188 ||||||||||||||| || ||||||| || | |||||| |||| || || | || Sbjct 1809 GTTACGGCCGCCGTTCACCGGGGCTTCGGTCGTCAGCTTCGCTTGCGCTGACCAACTTCC 1750 Query 189 TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAA 248 |||||||||| |||| |||||||||||||| || |||||||||||||||||||||| || Sbjct 1749 TTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATCGTCTTGCGACTTAGCGGAG 1690 Query 249 ACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACAGGC 308 ||||||||||||||||||||||||| ||| || ||| ||||| || | | | | ||| Sbjct 1689 ACCTGTGTTTTTGGTAAACAGTCGCCTGGATCTCTTCACTGCGACCAGCTCTCG-CTGGC 1631 Query 309 ACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 ||||||||| || ||||||||||| ||||||||||||||||||| Sbjct 1630 ACCCCTTCTTCCGAAGTTACGGGGCCATTTTGCCGAGTTCCTTA 1587 >seq10921 Length=25804 Score = 334 bits (370), Expect = 2e-89 Identities = 285/349 (82%), Gaps = 3/349 (1%) Strand=Plus/Minus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||||||||||||| | ||||||||| ||||| | | |||||||||||||| |||| Sbjct 4262 CGGCATCTTCACCGTCACTACAATTTCGCCGAGCTCACGGCTGAGACAGTGCCCAGATCG 4203 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 4202 TTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 4143 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184 |||||||||||||||||||||||||||||| ||||| |||||| |||| | || Sbjct 4142 TATAGTTACGGCCGCCGTTTACTGGGGCTTCGGTTCAATGCTTCTCTTGCGATGACTTCC 4083 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244 | |||||||||||||||||||||||| ||||| | ||||| ||| | | ||| || Sbjct 4082 TCTCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCATATACGTCGACATTAATCTTCGC 4023 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG-A 303 | | | |||||||||| ||||||||||| |||||| |||||||||||| ||| | Sbjct 4022 ATAGCCATGTGTTTTTGTTAAACAGTCGCCTGGGCCATTTCTCTGCGGCC--ACATTGCT 3965 Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 ||| ||| || |||| ||||||| |||| | |||||| ||||||||| Sbjct 3964 GTGGCTCCCTTTATCCCGAAGTTACAGGGTTAATTTGCCTAGTTCCTTA 3916 >seq11737 Length=277544 Score = 333 bits (368), Expect = 6e-89 Identities = 287/353 (81%), Gaps = 3/353 (1%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 || ||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct 217462 TAACCGGCATCTTCACCGATACTACAATTTCACCGAGCTCATGGTTGAGACAGTGCCCAG 217521 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 217522 ATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 217581 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||||||||||| ||| | ||||| |||| Sbjct 217582 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTCAAAAGCTTCTCCGAAGATAAC 217641 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 |||||||||||||||||||||||||| ||||| | ||||| ||| | | || Sbjct 217642 TTCCTCCCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCATATACGTCGACATTAATCT 217701 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT 300 | ||| | | |||||||||| ||||||||||| |||||| |||||||||||| ||| Sbjct 217702 TCGCATAGCCATGTGTTTTTGTTAAACAGTCGCCTGGGCCATTTCTCTGCGGCC--ACAT 217759 Query 301 AG-ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||| ||| || |||| ||||||| |||| | |||||| ||||||||| Sbjct 217760 TGCTGTGGCTCCCTTTATCCCGAAGTTACAGGGTTAATTTGCCTAGTTCCTTA 217812 >seq1447 Length=1029730 Score = 333 bits (368), Expect = 6e-89 Identities = 287/353 (81%), Gaps = 3/353 (1%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 || ||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct 758911 TAACCGGCATCTTCACCGATACTACAATTTCACCGAGCTCATGGTTGAGACAGTGCCCAG 758852 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 758851 ATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 758792 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||||||||||| ||| | ||||| |||| Sbjct 758791 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTCAAAAGCTTCTCCGAAGATAAC 758732 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 |||||||||||||||||||||||||| ||||| | ||||| ||| | | || Sbjct 758731 TTCCTCCCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCATATACGTCGACATTAATCT 758672 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT 300 | ||| | | |||||||||| ||||||||||| |||||| |||||||||||| ||| Sbjct 758671 TCGCATAGCCATGTGTTTTTGTTAAACAGTCGCCTGGGCCATTTCTCTGCGGCC--ACAT 758614 Query 301 AG-ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||| ||| || |||| ||||||| |||| | |||||| ||||||||| Sbjct 758613 TGCTGTGGCTCCCTTTATCCCGAAGTTACAGGGTTAATTTGCCTAGTTCCTTA 758561 >seq1 Length=2207822 Score = 246 bits (272), Expect = 6e-63 Identities = 285/384 (74%), Gaps = 35/384 (9%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||| |||| ||| ||| ||| | |||||| | | ||||||||| |||||| Sbjct 518840 GCATCATCACAAACATTTCAACTTCGCTGAGTCTCTGGAGGAGACAGTGTGGCCATCGTT 518781 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 518780 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 518721 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 |||||||||||||||||||||||| ||| | ||| | |||| | | || | Sbjct 518720 TAGTTACGGCCGCCGTTTACTGGGACTT-CGATCA----AGAGCTTGC---ACCCCAT-C 518670 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||||||||||||||||||| ||||||| ||| ||| || ||| |||| Sbjct 518669 AATTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCGACTTTCGTCTTTGCAG 518610 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT----------- 295 | |||||||||| ||||||||||| || |||||||||||||| Sbjct 518609 AGTGCTGTGTTTTTAATAAACAGTCGCAGCCACCGATTCTCTGCGGCCTCATTGGGCTCC 518550 Query 296 ----GT----------CATA-GACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTG 340 || | || | |||||| |||||| || ||||||||| |||| |||| Sbjct 518549 CCAAGTAAATGGTTCACCTACTAAAGGCACACCTTCTTCCGAAGTTACGGTGTCAATTTG 518490 Query 341 CCGAGTTCCTTAACAATAGTTCTC 364 ||||||||||| | | ||||||| Sbjct 518489 CCGAGTTCCTTCTCCAGAGTTCTC 518466 >seq13487 Length=4875 Score = 215 bits (238), Expect = 1e-53 Identities = 209/267 (78%), Gaps = 9/267 (3%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||| |||| | | ||| ||| | |||||| | ||||||||| |||||| Sbjct 2967 GCATCATCACAAACACTTCAACTTCGCTGAGTCTCAGGAGGAGACAGTGTGGCCATCGTT 2908 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2907 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 2848 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 |||||||||||||||||||||||| ||| | | | || |||| | | || | Sbjct 2847 TAGTTACGGCCGCCGTTTACTGGGACTTCAATCAAGAGC-----TTGC---ACCCCAT-C 2797 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||||||||||||||||||| ||||||| || ||| || || |||| Sbjct 2796 ATTTAATCTTCCAGCACCGGGCAGGCGTCACTCCCTATACGTCCACTTTCGTGTTTGCAG 2737 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGC 273 | | |||||||||| ||||||||||| Sbjct 2736 AGAGCTGTGTTTTTATTAAACAGTCGC 2710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062208768000