Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq11482 401 1e-109 seq1692 187 4e-45 seq9398 183 5e-44 seq5969 116 6e-24 seq10643 104 4e-20 seq10560 102 1e-19 seq11411 100 5e-19 seq10548 95.1 2e-17 seq9021 89.7 9e-16 seq14174 82.4 1e-13 seq11737 78.8 2e-12 seq1447 78.8 2e-12 seq5180 77.0 6e-12 seq1 75.2 2e-11 seq5522 73.4 7e-11 >seq11482 Length=289922 Score = 401 bits (444), Expect = 1e-109 Identities = 266/294 (90%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| || ||||||| |||| | | | ||||||||||||||||||||||||||||| Sbjct 15323 TACTGAGTTGAATTACTATTGCAACAATGACTCATCAGTAGGGTAAAACTAACCTGTCTC 15264 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 15263 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTGGCG 15204 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15203 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 15144 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 15143 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCT 15084 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||||||| | | ||||||||||||||||||| |||||| |||||||||| Sbjct 15083 TAAAATTTCTAAAGTCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 15030 Score = 279 bits (308), Expect = 9e-73 Identities = 203/233 (87%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAA 121 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||| Sbjct 7997 GACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTTGCGAA 7938 Query 122 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATG 181 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 7937 GTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATG 7878 Query 182 AACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTC 241 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | | Sbjct 7877 AACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGTCACCTCTTG-CAA 7819 Query 242 AAATTTCGAGGGA-CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||| ||| | | |||||||||||||||| |||| || ||||||| Sbjct 7818 AAAACTCGTTAAATCAAAAGGATCGATAGGCCCGGATTTCTCCGTCTGTATTC 7766 Score = 145 bits (160), Expect = 1e-32 Identities = 89/95 (94%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 95 GTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTG 36 Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCG 131 ||||||||||||||| ||| |||| ||||||||| Sbjct 35 GGTGAACAATCCAACACTTTGCGAAGTCTGCTTCG 1 >seq1692 Length=122686 Score = 187 bits (206), Expect = 4e-45 Identities = 150/178 (84%), Gaps = 5/178 (3%) Strand=Plus/Minus Query 63 ACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG--A 120 |||||||||||||||||||||||||||| | || ||||||||||||| || | | Sbjct 69412 ACGGTCTAAACCCAGCTCACGTTCCCTAG-ACAGGATGAACAATCCAACCCTATGGGCCA 69354 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| || | | | |||||||||||||||||||||||||||||||| ||||||||| Sbjct 69353 ATT--GCAACTCAACGGTAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAA 69296 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 | ||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 69295 GGACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGATACCTCTTGC 69238 >seq9398 Length=56181 Score = 183 bits (202), Expect = 5e-44 Identities = 148/176 (84%), Gaps = 5/176 (3%) Strand=Plus/Minus Query 65 GGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG--AAT 122 |||||||||||||||||||||||||| | || ||||||||||||| || | ||| Sbjct 36788 GGTCTAAACCCAGCTCACGTTCCCTAG-ACAGGATGAACAATCCAACCCTATGGGCCAAT 36730 Query 123 TCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGA 182 | || | | | |||||||||||||||||||||||||||||||| ||||||||| | Sbjct 36729 T--GCAACTCAACGGTAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAAGG 36672 Query 183 ACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 36671 ACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGATACCTCTTGC 36616 Score = 86.0 bits (94), Expect = 1e-14 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 177 CTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTA 236 ||| | ||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 36528 CTAAGGACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGATACCTCTT 36469 Query 237 GC 238 || Sbjct 36468 GC 36467 >seq5969 Length=90458 Score = 116 bits (128), Expect = 6e-24 Identities = 127/164 (77%), Gaps = 5/164 (3%) Strand=Plus/Minus Query 66 GTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG--AATT 123 |||||||||||||||||||| ||| | || ||||||||||||| ||| | || | Sbjct 73380 GTCTAAACCCAGCTCACGTTTCCTGCTCA-GGATGAACAATCCAACT-TTATGGGCAAAT 73323 Query 124 CTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAA 183 ||| | | | | ||||| ||||| || ||||||| ||||||| ||||| ||| | | Sbjct 73322 -TGCAACTCAACGGTTGGAAGTGCCGATATGGAAGGATTAAAAAGCGACGTCACTAAGGA 73264 Query 184 CGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 227 |||||||| || |||||||||||| || |||||||||||||| Sbjct 73263 CGCTTGGCCACCGCAAGCCAGTTATTTCTTTGGTAACTTTTCTG 73220 >seq10643 Length=38157 Score = 104 bits (114), Expect = 4e-20 Identities = 86/105 (82%), Gaps = 5/105 (5%) Strand=Plus/Plus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 ||||| |||||||||||||||||| || |||| ||||||||| | |||||||| | Sbjct 27185 ATGATTGGAAGAGCCGACATCGAAAGA-----AAGCGACGTCGCTAAGGACGCTTGGTCG 27239 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||| ||||||||||||||||||| ||| | || |||||| || Sbjct 27240 CCACATGCCAGTTATCCCTGTGGTAGCTTATGTGCTACCTCTTGC 27284 >seq10560 Length=334008 Score = 102 bits (112), Expect = 1e-19 Identities = 80/96 (83%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 ||| |||||||||||||||||||| |||| | ||||||| | ||||| ||| |||| Sbjct 44762 TAGAAAGAGCCGACATCGAAGGATTGAAAAAAGATGTCGCTAAGGACGCTCGGCCACCAC 44703 Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 233 ||||||||||| ||||| |||||||||||| |||| Sbjct 44702 AAGCCAGTTATTCCTGTTGTAACTTTTCTGAAACCT 44667 >seq11411 Length=19698 Score = 100 bits (110), Expect = 5e-19 Identities = 71/80 (89%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 1381 CAGGAGGGTAAAACTAACCTGTCTCGCGACGGTCTAAACCCAGCTCACGTTCCCTA-GAC 1439 Query 95 TGGGTGAACAATCCAACGCT 114 || ||||||||||||| || Sbjct 1440 AGGATGAACAATCCAACCCT 1459 >seq10548 Length=334413 Score = 95.1 bits (104), Expect = 2e-17 Identities = 81/100 (81%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 143 AGAGCCGACATC----GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACA 198 |||||||||||| ||||||||| || || |||||||| | ||||||| | |||||| Sbjct 332724 AGAGCCGACATCGAATGAAGGATCAGAATGCGCCGTCGCTAAGGACGCTTGACCGCCACA 332665 Query 199 AGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 || | ||||| |||||||| | ||||||| ||||||| || Sbjct 332664 AGACCGTTATTCCTGTGGTGAGTTTTCTGACACCTCTTGC 332625 >seq9021 Length=68980 Score = 89.7 bits (98), Expect = 9e-16 Identities = 126/172 (73%), Gaps = 10/172 (6%) Strand=Plus/Minus Query 63 ACGGTCTAAACCCAGCTCACGTTCCCTATT-AGTGGG-TGAACA--ATCCAACGC----T 114 |||||||||||||||||||||||||||| | || || |||||| ||| || | | Sbjct 37895 ACGGTCTAAACCCAGCTCACGTTCCCTACTCAGAAGGATGAACACAATCTGACCCGATGT 37836 Query 115 TACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGT 174 | | || || | | | |||||||| ||||||||| ||||||||||||| ||| Sbjct 37835 GGGCCAGTT--GCAACTTAACGGTAGGAAGAACCGACATCGTAGGATCAAAAAGCGACGC 37778 Query 175 CGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 226 ||| | | || | ||| ||||||||||| || ||| |||||| ||||| Sbjct 37777 CGCCAAGGACATTAGGCCACCACAAGCCAGAAATTGCTGCGGTAACGTTTCT 37726 >seq14174 Length=3265 Score = 82.4 bits (90), Expect = 1e-13 Identities = 124/175 (71%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||||||| || ||| |||| ||||| ||||| Sbjct 2498 CTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACC 2439 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| || | | | || | | | | || ||||||||||||| | |||| | Sbjct 2438 CTTGGGACGTACTACCGCCCC---AGGTTGCGATGAGCCGACATCGAGGTGCCAAACCTC 2382 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| | ||||| |||||| | | |||| ||||||||| ||||||||| Sbjct 2381 CGCGTCGATGTGAACTCTTGGCGGAGATCAGCCTGTTATCCCTAGAGTAACTTTT 2327 >seq11737 Length=277544 Score = 78.8 bits (86), Expect = 2e-12 Identities = 123/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| ||||| Sbjct 216911 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACC 216970 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| |||| | | | ||| || ||||||||||||| | | || | Sbjct 216971 CTTGGGACC---TTCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCGAACCTC 217027 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||| | ||||| | || |||| |||||||| | ||| ||||| Sbjct 217028 CCCGTCGATATGAGCTCTTGGGGGAGACTAGCCTGTTATCCCCGGCGTACCTTTT 217082 >seq1447 Length=1029730 Score = 78.8 bits (86), Expect = 2e-12 Identities = 123/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| ||||| Sbjct 759462 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACC 759403 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| |||| | | | ||| || ||||||||||||| | | || | Sbjct 759402 CTTGGGACC---TTCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCGAACCTC 759346 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||| | ||||| | || |||| |||||||| | ||| ||||| Sbjct 759345 CCCGTCGATATGAGCTCTTGGGGGAGACTAGCCTGTTATCCCCGGCGTACCTTTT 759291 >seq5180 Length=100460 Score = 77.0 bits (84), Expect = 6e-12 Identities = 77/100 (77%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 143 AGAGCCGACATC----GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACA 198 |||||||||||| ||||||||| | | ||||||| | ||||||| || ||||| Sbjct 73334 AGAGCCGACATCGAATGAAGGATCAGGATTCGCTGTCGCTAAGGACGCTTGACTACCACA 73393 Query 199 AGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 || ||||||| | |||||| | ||||||| ||| ||| || Sbjct 73394 AGACAGTTATTCATGTGGTGAGTTTTCTGACACTTCTTGC 73433 >seq1 Length=2207822 Score = 75.2 bits (82), Expect = 2e-11 Identities = 126/181 (70%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 || || |||||||| |||| | |||||||||||||||| || ||| || ||||| Sbjct 519413 ACCAAACTGTCTCACGACGTTTTAAACCCAGCTCACGTACCTCTTTAAATGGCGAACAGC 519354 Query 107 CCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163 | || ||| |||| | | || | | |||| || ||||||||||||| | || Sbjct 519353 CATACCCTTGGGACCGGCTACAGCCCCAGGATGA---GATGAGCCGACATCGAGGTGCCA 519297 Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 || | | ||||| ||||||| ||||| | | |||| |||||||| ||| |||| Sbjct 519296 AACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCAGAGTACCTTT 519237 Query 224 T 224 | Sbjct 519236 T 519236 >seq5522 Length=421 Score = 73.4 bits (80), Expect = 7e-11 Identities = 77/98 (79%), Gaps = 5/98 (5%) Strand=Plus/Plus Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGC--TTACCG 119 ||||||||||||||||||||||||||||| | || ||||||||||||| | | | Sbjct 327 GACGGTCTAAACCCAGCTCACGTTCCCTA-GACAGGATGAACAATCCAACCCTATGGGCC 385 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAA 157 ||| ||| | | | |||||||||||||||||||| Sbjct 386 AAT--TGCAACTCAACGGTAGGAAGAGCCGACATCGAA 421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854246208000