Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq11482 401 1e-109
seq1692 187 4e-45
seq9398 183 5e-44
seq5969 116 6e-24
seq10643 104 4e-20
seq10560 102 1e-19
seq11411 100 5e-19
seq10548 95.1 2e-17
seq9021 89.7 9e-16
seq14174 82.4 1e-13
seq11737 78.8 2e-12
seq1447 78.8 2e-12
seq5180 77.0 6e-12
seq1 75.2 2e-11
seq5522 73.4 7e-11
>seq11482
Length=289922
Score = 401 bits (444), Expect = 1e-109
Identities = 266/294 (90%), Gaps = 1/294 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| || ||||||| |||| | | | |||||||||||||||||||||||||||||
Sbjct 15323 TACTGAGTTGAATTACTATTGCAACAATGACTCATCAGTAGGGTAAAACTAACCTGTCTC 15264
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 15263 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTGGCG 15204
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 15203 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 15144
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 15143 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCT 15084
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||||||| | | ||||||||||||||||||| |||||| ||||||||||
Sbjct 15083 TAAAATTTCTAAAGTCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 15030
Score = 279 bits (308), Expect = 9e-73
Identities = 203/233 (87%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAA 121
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||
Sbjct 7997 GACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTTGCGAA 7938
Query 122 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATG 181
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 7937 GTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATG 7878
Query 182 AACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTC 241
|||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | |
Sbjct 7877 AACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGTCACCTCTTG-CAA 7819
Query 242 AAATTTCGAGGGA-CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||| ||| | | |||||||||||||||| |||| || |||||||
Sbjct 7818 AAAACTCGTTAAATCAAAAGGATCGATAGGCCCGGATTTCTCCGTCTGTATTC 7766
Score = 145 bits (160), Expect = 1e-32
Identities = 89/95 (94%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 95 GTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTG 36
Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCG 131
||||||||||||||| ||| |||| |||||||||
Sbjct 35 GGTGAACAATCCAACACTTTGCGAAGTCTGCTTCG 1
>seq1692
Length=122686
Score = 187 bits (206), Expect = 4e-45
Identities = 150/178 (84%), Gaps = 5/178 (3%)
Strand=Plus/Minus
Query 63 ACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG--A 120
|||||||||||||||||||||||||||| | || ||||||||||||| || | |
Sbjct 69412 ACGGTCTAAACCCAGCTCACGTTCCCTAG-ACAGGATGAACAATCCAACCCTATGGGCCA 69354
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||| || | | | |||||||||||||||||||||||||||||||| |||||||||
Sbjct 69353 ATT--GCAACTCAACGGTAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAA 69296
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 69295 GGACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGATACCTCTTGC 69238
>seq9398
Length=56181
Score = 183 bits (202), Expect = 5e-44
Identities = 148/176 (84%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 65 GGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG--AAT 122
|||||||||||||||||||||||||| | || ||||||||||||| || | |||
Sbjct 36788 GGTCTAAACCCAGCTCACGTTCCCTAG-ACAGGATGAACAATCCAACCCTATGGGCCAAT 36730
Query 123 TCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGA 182
| || | | | |||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 36729 T--GCAACTCAACGGTAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAAGG 36672
Query 183 ACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 36671 ACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGATACCTCTTGC 36616
Score = 86.0 bits (94), Expect = 1e-14
Identities = 56/62 (90%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 177 CTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTA 236
||| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 36528 CTAAGGACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGATACCTCTT 36469
Query 237 GC 238
||
Sbjct 36468 GC 36467
>seq5969
Length=90458
Score = 116 bits (128), Expect = 6e-24
Identities = 127/164 (77%), Gaps = 5/164 (3%)
Strand=Plus/Minus
Query 66 GTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG--AATT 123
|||||||||||||||||||| ||| | || ||||||||||||| ||| | || |
Sbjct 73380 GTCTAAACCCAGCTCACGTTTCCTGCTCA-GGATGAACAATCCAACT-TTATGGGCAAAT 73323
Query 124 CTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAA 183
||| | | | | ||||| ||||| || ||||||| ||||||| ||||| ||| | |
Sbjct 73322 -TGCAACTCAACGGTTGGAAGTGCCGATATGGAAGGATTAAAAAGCGACGTCACTAAGGA 73264
Query 184 CGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 227
|||||||| || |||||||||||| || ||||||||||||||
Sbjct 73263 CGCTTGGCCACCGCAAGCCAGTTATTTCTTTGGTAACTTTTCTG 73220
>seq10643
Length=38157
Score = 104 bits (114), Expect = 4e-20
Identities = 86/105 (82%), Gaps = 5/105 (5%)
Strand=Plus/Plus
Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193
||||| |||||||||||||||||| || |||| ||||||||| | |||||||| |
Sbjct 27185 ATGATTGGAAGAGCCGACATCGAAAGA-----AAGCGACGTCGCTAAGGACGCTTGGTCG 27239
Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
||||| ||||||||||||||||||| ||| | || |||||| ||
Sbjct 27240 CCACATGCCAGTTATCCCTGTGGTAGCTTATGTGCTACCTCTTGC 27284
>seq10560
Length=334008
Score = 102 bits (112), Expect = 1e-19
Identities = 80/96 (83%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197
||| |||||||||||||||||||| |||| | ||||||| | ||||| ||| ||||
Sbjct 44762 TAGAAAGAGCCGACATCGAAGGATTGAAAAAAGATGTCGCTAAGGACGCTCGGCCACCAC 44703
Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 233
||||||||||| ||||| |||||||||||| ||||
Sbjct 44702 AAGCCAGTTATTCCTGTTGTAACTTTTCTGAAACCT 44667
>seq11411
Length=19698
Score = 100 bits (110), Expect = 5e-19
Identities = 71/80 (89%), Gaps = 1/80 (1%)
Strand=Plus/Plus
Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1381 CAGGAGGGTAAAACTAACCTGTCTCGCGACGGTCTAAACCCAGCTCACGTTCCCTA-GAC 1439
Query 95 TGGGTGAACAATCCAACGCT 114
|| ||||||||||||| ||
Sbjct 1440 AGGATGAACAATCCAACCCT 1459
>seq10548
Length=334413
Score = 95.1 bits (104), Expect = 2e-17
Identities = 81/100 (81%), Gaps = 4/100 (4%)
Strand=Plus/Minus
Query 143 AGAGCCGACATC----GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACA 198
|||||||||||| ||||||||| || || |||||||| | ||||||| | ||||||
Sbjct 332724 AGAGCCGACATCGAATGAAGGATCAGAATGCGCCGTCGCTAAGGACGCTTGACCGCCACA 332665
Query 199 AGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
|| | ||||| |||||||| | ||||||| ||||||| ||
Sbjct 332664 AGACCGTTATTCCTGTGGTGAGTTTTCTGACACCTCTTGC 332625
>seq9021
Length=68980
Score = 89.7 bits (98), Expect = 9e-16
Identities = 126/172 (73%), Gaps = 10/172 (6%)
Strand=Plus/Minus
Query 63 ACGGTCTAAACCCAGCTCACGTTCCCTATT-AGTGGG-TGAACA--ATCCAACGC----T 114
|||||||||||||||||||||||||||| | || || |||||| ||| || | |
Sbjct 37895 ACGGTCTAAACCCAGCTCACGTTCCCTACTCAGAAGGATGAACACAATCTGACCCGATGT 37836
Query 115 TACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGT 174
| | || || | | | |||||||| ||||||||| ||||||||||||| |||
Sbjct 37835 GGGCCAGTT--GCAACTTAACGGTAGGAAGAACCGACATCGTAGGATCAAAAAGCGACGC 37778
Query 175 CGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 226
||| | | || | ||| ||||||||||| || ||| |||||| |||||
Sbjct 37777 CGCCAAGGACATTAGGCCACCACAAGCCAGAAATTGCTGCGGTAACGTTTCT 37726
>seq14174
Length=3265
Score = 82.4 bits (90), Expect = 1e-13
Identities = 124/175 (71%), Gaps = 6/175 (3%)
Strand=Plus/Minus
Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112
|||||||| |||| ||| |||||||||||||| || ||| |||| ||||| |||||
Sbjct 2498 CTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACC 2439
Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169
||| || | | | || | | | | || ||||||||||||| | |||| |
Sbjct 2438 CTTGGGACGTACTACCGCCCC---AGGTTGCGATGAGCCGACATCGAGGTGCCAAACCTC 2382
Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
||||| | ||||| |||||| | | |||| ||||||||| |||||||||
Sbjct 2381 CGCGTCGATGTGAACTCTTGGCGGAGATCAGCCTGTTATCCCTAGAGTAACTTTT 2327
>seq11737
Length=277544
Score = 78.8 bits (86), Expect = 2e-12
Identities = 123/175 (70%), Gaps = 6/175 (3%)
Strand=Plus/Plus
Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112
|||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| |||||
Sbjct 216911 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACC 216970
Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169
||| ||| |||| | | | ||| || ||||||||||||| | | || |
Sbjct 216971 CTTGGGACC---TTCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCGAACCTC 217027
Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
||||| ||||| | ||||| | || |||| |||||||| | ||| |||||
Sbjct 217028 CCCGTCGATATGAGCTCTTGGGGGAGACTAGCCTGTTATCCCCGGCGTACCTTTT 217082
>seq1447
Length=1029730
Score = 78.8 bits (86), Expect = 2e-12
Identities = 123/175 (70%), Gaps = 6/175 (3%)
Strand=Plus/Minus
Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112
|||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| |||||
Sbjct 759462 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACC 759403
Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169
||| ||| |||| | | | ||| || ||||||||||||| | | || |
Sbjct 759402 CTTGGGACC---TTCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCGAACCTC 759346
Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
||||| ||||| | ||||| | || |||| |||||||| | ||| |||||
Sbjct 759345 CCCGTCGATATGAGCTCTTGGGGGAGACTAGCCTGTTATCCCCGGCGTACCTTTT 759291
>seq5180
Length=100460
Score = 77.0 bits (84), Expect = 6e-12
Identities = 77/100 (77%), Gaps = 4/100 (4%)
Strand=Plus/Plus
Query 143 AGAGCCGACATC----GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACA 198
|||||||||||| ||||||||| | | ||||||| | ||||||| || |||||
Sbjct 73334 AGAGCCGACATCGAATGAAGGATCAGGATTCGCTGTCGCTAAGGACGCTTGACTACCACA 73393
Query 199 AGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
|| ||||||| | |||||| | ||||||| ||| ||| ||
Sbjct 73394 AGACAGTTATTCATGTGGTGAGTTTTCTGACACTTCTTGC 73433
>seq1
Length=2207822
Score = 75.2 bits (82), Expect = 2e-11
Identities = 126/181 (70%), Gaps = 6/181 (3%)
Strand=Plus/Minus
Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106
|| || |||||||| |||| | |||||||||||||||| || ||| || |||||
Sbjct 519413 ACCAAACTGTCTCACGACGTTTTAAACCCAGCTCACGTACCTCTTTAAATGGCGAACAGC 519354
Query 107 CCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163
| || ||| |||| | | || | | |||| || ||||||||||||| | ||
Sbjct 519353 CATACCCTTGGGACCGGCTACAGCCCCAGGATGA---GATGAGCCGACATCGAGGTGCCA 519297
Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223
|| | | ||||| ||||||| ||||| | | |||| |||||||| ||| ||||
Sbjct 519296 AACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCAGAGTACCTTT 519237
Query 224 T 224
|
Sbjct 519236 T 519236
>seq5522
Length=421
Score = 73.4 bits (80), Expect = 7e-11
Identities = 77/98 (79%), Gaps = 5/98 (5%)
Strand=Plus/Plus
Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGC--TTACCG 119
||||||||||||||||||||||||||||| | || ||||||||||||| | | |
Sbjct 327 GACGGTCTAAACCCAGCTCACGTTCCCTA-GACAGGATGAACAATCCAACCCTATGGGCC 385
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAA 157
||| ||| | | | ||||||||||||||||||||
Sbjct 386 AAT--TGCAACTCAACGGTAGGAAGAGCCGACATCGAA 421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854246208000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |