Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq11737 205 1e-50
seq1447 205 1e-50
seq10921 187 3e-45
seq13487 123 3e-26
seq1 114 1e-23
seq14174 104 3e-20
>seq11737
Length=277544
Score = 205 bits (226), Expect = 1e-50
Identities = 147/178 (83%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||
Sbjct 217439 GGGTCTTTTCGTCCCACAGCGGGTAACCGGCATCTTCACCGATACTACAATTTCACCGAG 217498
Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144
|||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 217499 CTCATGGTTGAGACAGTGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGA 217558
Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202
||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 217559 CAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 217616
>seq1447
Length=1029730
Score = 205 bits (226), Expect = 1e-50
Identities = 147/178 (83%), Gaps = 0/178 (0%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||
Sbjct 758934 GGGTCTTTTCGTCCCACAGCGGGTAACCGGCATCTTCACCGATACTACAATTTCACCGAG 758875
Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144
|||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 758874 CTCATGGTTGAGACAGTGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGA 758815
Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202
||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 758814 CAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 758757
>seq10921
Length=25804
Score = 187 bits (206), Expect = 3e-45
Identities = 144/180 (80%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||||| | ||||||| |||||||||||||| ||||||||||| | |
Sbjct 4291 CGGGGTCTTTCCGTCCCGTGGCGGGTAGACGGCATCTTCACCGTCACTACAATTTCGCCG 4232
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 4231 AGCTCACGGCTGAGACAGTGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCC 4172
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 4171 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 4112
>seq13487
Length=4875
Score = 123 bits (136), Expect = 3e-26
Identities = 117/151 (77%), Gaps = 2/151 (1%)
Strand=Plus/Minus
Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83
||||||||| |||| |||||| | ||||| |||| | ||| ||| ||| ||||
Sbjct 2997 GGGGTCTTTCCGTCTAGCCGCGGGGAGATTGCATCATCACAAACACTTCAACTTCGCTGA 2938
Query 84 G-CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| |||| || ||||||| ||| ||||||||||||||||||||||||||
Sbjct 2937 GTCTCA-GGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 2879
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||
Sbjct 2878 GACAAGGAATTTCGCTACCTTAGGACCGTTA 2848
>seq1
Length=2207822
Score = 114 bits (126), Expect = 1e-23
Identities = 115/151 (76%), Gaps = 2/151 (1%)
Strand=Plus/Minus
Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83
||||||||| |||| |||||| | ||||| |||| | | | ||| ||| ||||
Sbjct 518870 GGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGA 518811
Query 84 GCTCAC-GGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| || | || ||||||| ||| ||||||||||||||||||||||||||
Sbjct 518810 G-TCTCTGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 518752
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||
Sbjct 518751 GACAAGGAATTTCGCTACCTTAGGACCGTTA 518721
>seq14174
Length=3265
Score = 104 bits (114), Expect = 3e-20
Identities = 112/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || | |||||||| || | | | ||||| | |||
Sbjct 1960 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGTATCTTCACAGACAATCCTATTTCGCCGAG 1901
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 1900 C-CTCTCTCCGAGACAGCATCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 1842
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 1841 ACAAGGAATTTCGCTACCTTAGGACCGTTA 1812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547104582000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |