Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01001182.1
Length=261
Score E
Sequences producing significant alignments: (Bits) Value
seq1 91.5 2e-16
>seq1
Length=2207822
Score = 91.5 bits (100), Expect = 2e-16
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116
||| |||||||||||||| || | | || ||||| || || |||| ||||| || ||
Sbjct 2112499 GCCAGGTGCCGGCGCTTCCTCAATGATTTTTTGGTGGCGGCGCTGCATGGAGCAGTCACG 2112440
Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176
|||||||| || ||| | || || |||| | ||| | || | ||||| || ||
Sbjct 2112439 CTCGCCCAGCCAGACGGCATTGCGGTGCTCGTCCGCCAGGATCTGGATCTCCACATGGCG 2112380
Query 177 TGGGTTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGCCCGCTTC 236
||||| |||| |||| |||| |||||| ||||||||||| || || || ||
Sbjct 2112379 CGGGTTCTCCAGGAACTTCTCCATATAGACCTGGGGGTTGCCGAAGGCAGCACCGGCCTC 2112320
Query 237 GGAGCGAGTC 246
||||| |||
Sbjct 2112319 AGAGCGGGTC 2112310
Score = 75.2 bits (82), Expect = 2e-11
Identities = 67/84 (80%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 58 CCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGG 117
|||||||| || ||||||||||| ||||| |||||||| || |||| |||||| |||||
Sbjct 1622463 CCCGGTGCGGGGGCTTCTTCCAGCACCTTTTGGTGACGGCGCTGCACCGAGCAGTCGCGC 1622522
Query 118 TCGCCCAGGTGGATGGCGTGGCCC 141
||| |||| || | || ||||
Sbjct 1622523 TCGAAAAGGTAGACGCAGTCGCCC 1622546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 735871660000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |