Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01001187.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq2224 78.8 1e-12 >seq2224 Length=1872321 Score = 78.8 bits (86), Expect = 1e-12 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 20 GCGACGCTTGAGCTTTGCCCAGGTACTGCATGCGCGCGACGATTTCCTGGCCGGTGTAGC 79 ||| ||||||||| | |||| ||||||| | || || || | || ||||||| ||||| Sbjct 1597070 GCGGCGCTTGAGCGT-GCCCCGGTACTGGCTCCGGGCCACCACCTCTTGGCCGGGGTAGC 1597012 Query 80 AGCCTTTCTTGAAGCTGACGCCGCCGACGGCCTGCAGGTTGAGCATTTGCGGGATGAA 137 ||||||| |||||| | ||||| || || || | |||| ||| ||||||| ||| Sbjct 1597011 AGCCTTTTTTGAAGTTCACGCCCCCCACCAGCTCAAAATTGACCATCTGCGGGACGAA 1596954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735871660000