Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq13487 497 3e-138 seq1 437 2e-120 seq11737 271 2e-70 seq1447 271 2e-70 seq14174 224 2e-56 seq10921 203 8e-50 seq5180 86.0 2e-14 seq13336 82.4 2e-13 seq9717 78.8 2e-12 seq11482 77.0 8e-12 >seq13487 Length=4875 Score = 497 bits (550), Expect = 3e-138 Identities = 368/415 (89%), Gaps = 11/415 (3%) Strand=Plus/Minus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || |||||||| |||| || ||||||||| ||||| |||| ||||||||||||||||| | Sbjct 1678 CCTATCCACAGCTCATCCC-CTAACTTTT-CAACGTTAGTGGGTTCGGTCCTCCAGTTGG 1621 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | ||||||||||||| ||||||| |||| ||||||||| | ||||| |||||||| | Sbjct 1620 T-GTTACCCAACCTT-CAACCTGGCCAT-GGATAGATCATCTGGTTT-CGGGTCTACA-C 1566 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 ||||||||||||||||||| | |||||||||| |||||||||| ||||| ||||||||| Sbjct 1565 CCAGCGACTAGACGCCCTATTCGGACTCGCTTT-CGCTACGCCTTCCCTACTCGGTTAAG 1507 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 ||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| | || Sbjct 1506 CTT-GCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACCCCATAA 1448 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 || || |||| |||| ||||| ||| ||||||||||||||||||||||||||||| |||| Sbjct 1447 AGAGG-CTCCGACTGTTTGTATGCACACGGTTTCAGGATCTATTTCACTCCCCTC-CCGG 1390 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1389 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCATGAGTATTTAG 1330 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||||||||||||||||||||||||||||||| |||| |||| ||| |||||| Sbjct 1329 CCTTGGAGGATGGTCCCCCCATATTCAGACAGGATTTCACGTGTCCCGCCCTACT 1275 >seq1 Length=2207822 Score = 437 bits (484), Expect = 2e-120 Identities = 354/415 (85%), Gaps = 14/415 (3%) Strand=Plus/Minus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || |||||||| |||| |||||| |||| |||| |||||||||||| |||||||| | Sbjct 517597 CCTATCCACAGCTCAT-CCGCTAG-TTTTGCAACACTAGTCGGTTCGGACCTCCAGTGCG 517540 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | |||||| ||||| || |||| |||| ||||||||| || ||||| |||||||| | Sbjct 517539 T-GTTACCGCACCTT-CATCCTGGCCAT-GGATAGATCACCTGGTTT-CGGGTCTACA-C 517485 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 ||||||||||||||||||| | |||||| ||| | || ||||| ||||||||||||||| Sbjct 517484 CCAGCGACTAGACGCCCTATTCGGACTCGGTTTCC-CTTCGCCTTCCCTATTCGGTTAAG 517426 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 517425 CTT-GCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCTTTC- 517368 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 ||||||| ||| ||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 517367 ---GGGCTCCTACTTTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCGG 517312 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 |||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct 517311 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCGATTACGAGTATTTAG 517252 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||||||||||||||||||||||||||||||| |||| |||| ||| |||||| Sbjct 517251 CCTTGGAGGATGGTCCCCCCATATTCAGACAGGATTTCACGTGTCCCGCCCTACT 517197 >seq11737 Length=277544 Score = 271 bits (300), Expect = 2e-70 Identities = 318/416 (76%), Gaps = 13/416 (3%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||||||||| || |||||| ||||| | |||||||||||||| | || ||| Sbjct 218642 CCACAGGTCAT-CCAAAGACTTTT-CAACGTCAACTGGTTCGGTCCTCCACTGTGT-GTT 218698 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| | ||| |||||||||||| || |||||| | |||||| || ||||| | |||| Sbjct 218699 ACCACAGCTT-CAACCTGCCCATGGG-TAGATCACACGGTTT-CGCGTCTAAT-CCCACT 218754 Query 129 GACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATT---CGGTTAAGC 184 |||| ||||||| | ||||||||||| ||||||| |||| | | | | | | Sbjct 218755 AACTATTTCGCCCTATTCAGACTCGCTTT-CGCTACGGCTCCGGTGCTGAACACCTTAAC 218813 Query 185 TTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244 | || | || | ||| ||| | | |||||| ||||||| |||| ||||| || || Sbjct 218814 CTCGCTAGGGAGATTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACATCACGAA 218873 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 | | |||| || ||||||| || |||||||||||| ||| |||||| | | | | Sbjct 218874 GATG-CTCCGACCGCTTGTAGGCGTACGGTTTCAGGTTCTCTTTCACCCTTTTATTCAAA 218932 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct 218933 GTGCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCTCTCAGGAGTATTTAGC 218992 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||||| |||||||| |||||||||||||| | |||| |||| |||| |||||||| Sbjct 218993 CTTGGAAGATGGTCCTCCCATATTCAGACAGAATTTCACGTGTTCCGCCCTACTCG 219048 >seq1447 Length=1029730 Score = 271 bits (300), Expect = 2e-70 Identities = 318/416 (76%), Gaps = 13/416 (3%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||||||||| || |||||| ||||| | |||||||||||||| | || ||| Sbjct 757731 CCACAGGTCAT-CCAAAGACTTTT-CAACGTCAACTGGTTCGGTCCTCCACTGTGT-GTT 757675 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| | ||| |||||||||||| || |||||| | |||||| || ||||| | |||| Sbjct 757674 ACCACAGCTT-CAACCTGCCCATGGG-TAGATCACACGGTTT-CGCGTCTAAT-CCCACT 757619 Query 129 GACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATT---CGGTTAAGC 184 |||| ||||||| | ||||||||||| ||||||| |||| | | | | | | Sbjct 757618 AACTATTTCGCCCTATTCAGACTCGCTTT-CGCTACGGCTCCGGTGCTGAACACCTTAAC 757560 Query 185 TTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244 | || | || | ||| ||| | | |||||| ||||||| |||| ||||| || || Sbjct 757559 CTCGCTAGGGAGATTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACATCACGAA 757500 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 | | |||| || ||||||| || |||||||||||| ||| |||||| | | | | Sbjct 757499 GATG-CTCCGACCGCTTGTAGGCGTACGGTTTCAGGTTCTCTTTCACCCTTTTATTCAAA 757441 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct 757440 GTGCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCTCTCAGGAGTATTTAGC 757381 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||||| |||||||| |||||||||||||| | |||| |||| |||| |||||||| Sbjct 757380 CTTGGAAGATGGTCCTCCCATATTCAGACAGAATTTCACGTGTTCCGCCCTACTCG 757325 >seq14174 Length=3265 Score = 224 bits (248), Expect = 2e-56 Identities = 310/416 (75%), Gaps = 17/416 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| |||| | ||||||||| |||||||||| |||||| ||| | ||| Sbjct 705 CCACACCTCAT-CCGCCGA-TTTTTCAACATCGGTCGGTTCGGACCTCCACTTAAT-GTT 649 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 || ||| ||| || |||| ||| || |||||| || || || ||||||||| | | Sbjct 648 ACTCAAGCTT-CATCCTGGACAT-GGTTAGATCACCGGGGTT-CGGGTCTATAAAC-ACT 593 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGG---TTAAGCT 185 || || ||||||| | ||||||||||| |||| | || | |||| |||| || Sbjct 592 GATTAT-CGCCCTATTCAGACTCGCTTT-CGCTTTGGCTTCGACATTCTCGTCTTAACCT 535 Query 186 TTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAG 245 ||| || ||||||||| | | |||| | ||| ||| || | ||||||| || Sbjct 534 A--CCAGTGCCTATAAGTCGCCGGCTCATTCTTCAACAGGCACACCGTCACCCGTTTAAT 477 Query 246 TGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGG 305 ||||||| | |||||||| || | ||||||| | ||||||||||||||||| |||||| Sbjct 476 CGGGCTCCGATTGCTTGTAAGCTGATGGTTTCATGTTCTATTTCACTCCCCTC-CCGGGG 418 Query 306 TTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCC 365 |||||||| |||||||||| ||||||| ||| |||||||||| ||| ||||||||||| Sbjct 417 TTCTTTTCACCTTTCCCTCGCGGTACTGTTTCGCTATCGGTCACACAGGAGTATTTAGCC 358 Query 366 -TTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || |||| |||||| | ||||| || | || | |||||||| | ||||||| Sbjct 357 TTTCGAGG-TGGTCCTCGATGATTCACACGGAATTCCACGTGCTCCATGCTACTCG 303 >seq10921 Length=25804 Score = 203 bits (224), Expect = 8e-50 Identities = 305/419 (73%), Gaps = 22/419 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| ||| |||||| ||||| |||| ||||||||||||| || || Sbjct 3087 CCACAGTTCAT-CCGAACACTTTT-CAACGTATACCGGTACGGTCCTCCAGTTGGTC-TT 3031 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||||||| ||||||| |||| || |||||| | ||||| || ||||| || | Sbjct 3030 ACCCAACCTT-CAACCTGACCATGGG-TAGATCACTAGGTTT-CGCGTCTACAGCC-ACA 2975 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTG 188 ||| |||||||| | ||||||||||| |||| || |||| |||| | || ||| Sbjct 2974 AACTTAACGCCCTATTCAGACTCGCTTT-CGCTTCGGCTCCG--ATTCTGAAAATCTTAA 2918 Query 189 CCAC-----TGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 || | ||| ||| ||| | |||||| ||||||| |||| |||||| | Sbjct 2917 CCTCGCTTGTGACCGTAACTCGTAGGATCATTATGCAAAAGGCACGCCGTCACCATATCG 2858 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCC---CTCTC 300 ||| |||| || ||||||| || |||||||||||| ||| |||||| | ||||| Sbjct 2857 CATGG-CTCCGACCGCTTGTAGGCGTACGGTTTCAGGTTCTTTTTCACCCGGATACTCTC 2799 Query 301 CGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATT 360 || | |||||| ||||||| |||| ||||| |||| |||||||| ||||||||||| Sbjct 2798 CGTG---CTTTTCACCTTTCCTTCACAGTACTTGTTCGCTATCGGTGTCTCAGTAGTATT 2742 Query 361 TAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||||| |||||| | || ||||||| ||||| | || || ||||||| Sbjct 2741 TAGCCTTGGCAGATGGTGCTGCCGAATTCAGAGGGGGTTTCACCGGCCCCCACCTACTC 2683 >seq5180 Length=100460 Score = 86.0 bits (94), Expect = 2e-14 Identities = 92/115 (80%), Gaps = 5/115 (4%) Strand=Plus/Plus Query 258 GCTTGTACGCATA-CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCC 316 |||||||| | | |||||||| | ||| ||| |||| | ||||| | ||||||||| | Sbjct 62161 GCTTGTACTCTGAGCGGTTTCACGGTCT-TTTGACTCTC-TCTCCAGAGTTCTTTTCAAC 62218 Query 317 TTTCCCTCACGGTACTAGTTCACTATCGGT-CAGTCAGTAGTATTTAGCCTTGGA 370 ||||||| |||||||| ||||||||||||| | || || ||||||||||| || Sbjct 62219 TTTCCCTTACGGTACTTGTTCACTATCGGTCCTGTGGATA-TATTTAGCCTTAGA 62272 >seq13336 Length=709859 Score = 82.4 bits (90), Expect = 2e-13 Identities = 75/91 (82%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 258 GCTTGTACGCATA-CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCC 316 |||||||| | | |||||||| | ||| ||| |||| | ||||| | ||||||||| | Sbjct 173468 GCTTGTACTCTGAGCGGTTTCACGGTCT-TTTGACTCTC-TCTCCAGAGTTCTTTTCAAC 173411 Query 317 TTTCCCTCACGGTACTAGTTCACTATCGGTC 347 ||||||| |||||||| |||||||||||||| Sbjct 173410 TTTCCCTTACGGTACTTGTTCACTATCGGTC 173380 >seq9717 Length=47301 Score = 78.8 bits (86), Expect = 2e-12 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 |||||||| | ||| ||| |||| | ||||| | ||||||||| |||||||| ||||| Sbjct 7628 CGGTTTCACGGTCT-TTTGACTCTC-TCTCCAGAGTTCTTTTCAACTTTCCCTTTCGGTA 7685 Query 331 CTAGTTCACTATCGGT-CAGTCAGTAGTATTTAGCCTTGGA 370 || ||||||||||||| | || || ||||||||||| || Sbjct 7686 CTTGTTCACTATCGGTCCTGTGGATA-TATTTAGCCTTAGA 7725 >seq11482 Length=289922 Score = 77.0 bits (84), Expect = 8e-12 Identities = 81/103 (79%), Gaps = 3/103 (3%) Strand=Plus/Minus Query 269 TACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGG 328 |||||||| | | |||||| |||| | ||| | | || |||||| ||||||||||||| Sbjct 5102 TACGGTTTTACGTACTATTTAACTCTC-TCTTCAGAGTGCTTTTCAACTTTCCCTCACGG 5044 Query 329 TACTAGTTCACTATCGGTC-AGTCAGTAGTATTTAGCCTTGGA 370 |||| |||| ||||||||| || | | |||||||| ||||| Sbjct 5043 TACTTGTTCGCTATCGGTCTCGTTA-TGATATTTAGCTTTGGA 5002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241376512000