Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq13487 497 3e-138
seq1 437 2e-120
seq11737 271 2e-70
seq1447 271 2e-70
seq14174 224 2e-56
seq10921 203 8e-50
seq5180 86.0 2e-14
seq13336 82.4 2e-13
seq9717 78.8 2e-12
seq11482 77.0 8e-12
>seq13487
Length=4875
Score = 497 bits (550), Expect = 3e-138
Identities = 368/415 (89%), Gaps = 11/415 (3%)
Strand=Plus/Minus
Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63
|| |||||||| |||| || ||||||||| ||||| |||| ||||||||||||||||| |
Sbjct 1678 CCTATCCACAGCTCATCCC-CTAACTTTT-CAACGTTAGTGGGTTCGGTCCTCCAGTTGG 1621
Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123
| ||||||||||||| ||||||| |||| ||||||||| | ||||| |||||||| |
Sbjct 1620 T-GTTACCCAACCTT-CAACCTGGCCAT-GGATAGATCATCTGGTTT-CGGGTCTACA-C 1566
Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183
||||||||||||||||||| | |||||||||| |||||||||| ||||| |||||||||
Sbjct 1565 CCAGCGACTAGACGCCCTATTCGGACTCGCTTT-CGCTACGCCTTCCCTACTCGGTTAAG 1507
Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243
||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| | ||
Sbjct 1506 CTT-GCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACCCCATAA 1448
Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303
|| || |||| |||| ||||| ||| ||||||||||||||||||||||||||||| ||||
Sbjct 1447 AGAGG-CTCCGACTGTTTGTATGCACACGGTTTCAGGATCTATTTCACTCCCCTC-CCGG 1390
Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1389 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCATGAGTATTTAG 1330
Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
||||||||||||||||||||||||||||||| |||| |||| ||| ||||||
Sbjct 1329 CCTTGGAGGATGGTCCCCCCATATTCAGACAGGATTTCACGTGTCCCGCCCTACT 1275
>seq1
Length=2207822
Score = 437 bits (484), Expect = 2e-120
Identities = 354/415 (85%), Gaps = 14/415 (3%)
Strand=Plus/Minus
Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63
|| |||||||| |||| |||||| |||| |||| |||||||||||| |||||||| |
Sbjct 517597 CCTATCCACAGCTCAT-CCGCTAG-TTTTGCAACACTAGTCGGTTCGGACCTCCAGTGCG 517540
Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123
| |||||| ||||| || |||| |||| ||||||||| || ||||| |||||||| |
Sbjct 517539 T-GTTACCGCACCTT-CATCCTGGCCAT-GGATAGATCACCTGGTTT-CGGGTCTACA-C 517485
Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183
||||||||||||||||||| | |||||| ||| | || ||||| |||||||||||||||
Sbjct 517484 CCAGCGACTAGACGCCCTATTCGGACTCGGTTTCC-CTTCGCCTTCCCTATTCGGTTAAG 517426
Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 517425 CTT-GCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCTTTC- 517368
Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303
||||||| ||| ||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct 517367 ---GGGCTCCTACTTTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCGG 517312
Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363
|||||||||||||||||||||||||||||||||||||||||||| | | |||||||||
Sbjct 517311 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCGATTACGAGTATTTAG 517252
Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
||||||||||||||||||||||||||||||| |||| |||| ||| ||||||
Sbjct 517251 CCTTGGAGGATGGTCCCCCCATATTCAGACAGGATTTCACGTGTCCCGCCCTACT 517197
>seq11737
Length=277544
Score = 271 bits (300), Expect = 2e-70
Identities = 318/416 (76%), Gaps = 13/416 (3%)
Strand=Plus/Plus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||||||||| || |||||| ||||| | |||||||||||||| | || |||
Sbjct 218642 CCACAGGTCAT-CCAAAGACTTTT-CAACGTCAACTGGTTCGGTCCTCCACTGTGT-GTT 218698
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
||| | ||| |||||||||||| || |||||| | |||||| || ||||| | ||||
Sbjct 218699 ACCACAGCTT-CAACCTGCCCATGGG-TAGATCACACGGTTT-CGCGTCTAAT-CCCACT 218754
Query 129 GACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATT---CGGTTAAGC 184
|||| ||||||| | ||||||||||| ||||||| |||| | | | | | |
Sbjct 218755 AACTATTTCGCCCTATTCAGACTCGCTTT-CGCTACGGCTCCGGTGCTGAACACCTTAAC 218813
Query 185 TTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244
| || | || | ||| ||| | | |||||| ||||||| |||| ||||| || ||
Sbjct 218814 CTCGCTAGGGAGATTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACATCACGAA 218873
Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304
| | |||| || ||||||| || |||||||||||| ||| |||||| | | | |
Sbjct 218874 GATG-CTCCGACCGCTTGTAGGCGTACGGTTTCAGGTTCTCTTTCACCCTTTTATTCAAA 218932
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
|| |||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 218933 GTGCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCTCTCAGGAGTATTTAGC 218992
Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
|||||| |||||||| |||||||||||||| | |||| |||| |||| ||||||||
Sbjct 218993 CTTGGAAGATGGTCCTCCCATATTCAGACAGAATTTCACGTGTTCCGCCCTACTCG 219048
>seq1447
Length=1029730
Score = 271 bits (300), Expect = 2e-70
Identities = 318/416 (76%), Gaps = 13/416 (3%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||||||||| || |||||| ||||| | |||||||||||||| | || |||
Sbjct 757731 CCACAGGTCAT-CCAAAGACTTTT-CAACGTCAACTGGTTCGGTCCTCCACTGTGT-GTT 757675
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
||| | ||| |||||||||||| || |||||| | |||||| || ||||| | ||||
Sbjct 757674 ACCACAGCTT-CAACCTGCCCATGGG-TAGATCACACGGTTT-CGCGTCTAAT-CCCACT 757619
Query 129 GACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATT---CGGTTAAGC 184
|||| ||||||| | ||||||||||| ||||||| |||| | | | | | |
Sbjct 757618 AACTATTTCGCCCTATTCAGACTCGCTTT-CGCTACGGCTCCGGTGCTGAACACCTTAAC 757560
Query 185 TTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244
| || | || | ||| ||| | | |||||| ||||||| |||| ||||| || ||
Sbjct 757559 CTCGCTAGGGAGATTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACATCACGAA 757500
Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304
| | |||| || ||||||| || |||||||||||| ||| |||||| | | | |
Sbjct 757499 GATG-CTCCGACCGCTTGTAGGCGTACGGTTTCAGGTTCTCTTTCACCCTTTTATTCAAA 757441
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
|| |||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 757440 GTGCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCTCTCAGGAGTATTTAGC 757381
Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
|||||| |||||||| |||||||||||||| | |||| |||| |||| ||||||||
Sbjct 757380 CTTGGAAGATGGTCCTCCCATATTCAGACAGAATTTCACGTGTTCCGCCCTACTCG 757325
>seq14174
Length=3265
Score = 224 bits (248), Expect = 2e-56
Identities = 310/416 (75%), Gaps = 17/416 (4%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| |||| | ||||||||| |||||||||| |||||| ||| | |||
Sbjct 705 CCACACCTCAT-CCGCCGA-TTTTTCAACATCGGTCGGTTCGGACCTCCACTTAAT-GTT 649
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|| ||| ||| || |||| ||| || |||||| || || || ||||||||| | |
Sbjct 648 ACTCAAGCTT-CATCCTGGACAT-GGTTAGATCACCGGGGTT-CGGGTCTATAAAC-ACT 593
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGG---TTAAGCT 185
|| || ||||||| | ||||||||||| |||| | || | |||| |||| ||
Sbjct 592 GATTAT-CGCCCTATTCAGACTCGCTTT-CGCTTTGGCTTCGACATTCTCGTCTTAACCT 535
Query 186 TTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAG 245
||| || ||||||||| | | |||| | ||| ||| || | ||||||| ||
Sbjct 534 A--CCAGTGCCTATAAGTCGCCGGCTCATTCTTCAACAGGCACACCGTCACCCGTTTAAT 477
Query 246 TGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGG 305
||||||| | |||||||| || | ||||||| | ||||||||||||||||| ||||||
Sbjct 476 CGGGCTCCGATTGCTTGTAAGCTGATGGTTTCATGTTCTATTTCACTCCCCTC-CCGGGG 418
Query 306 TTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCC 365
|||||||| |||||||||| ||||||| ||| |||||||||| ||| |||||||||||
Sbjct 417 TTCTTTTCACCTTTCCCTCGCGGTACTGTTTCGCTATCGGTCACACAGGAGTATTTAGCC 358
Query 366 -TTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
|| |||| |||||| | ||||| || | || | |||||||| | |||||||
Sbjct 357 TTTCGAGG-TGGTCCTCGATGATTCACACGGAATTCCACGTGCTCCATGCTACTCG 303
>seq10921
Length=25804
Score = 203 bits (224), Expect = 8e-50
Identities = 305/419 (73%), Gaps = 22/419 (5%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
|||||| |||| ||| |||||| ||||| |||| ||||||||||||| || ||
Sbjct 3087 CCACAGTTCAT-CCGAACACTTTT-CAACGTATACCGGTACGGTCCTCCAGTTGGTC-TT 3031
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|||||||||| ||||||| |||| || |||||| | ||||| || ||||| || |
Sbjct 3030 ACCCAACCTT-CAACCTGACCATGGG-TAGATCACTAGGTTT-CGCGTCTACAGCC-ACA 2975
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTG 188
||| |||||||| | ||||||||||| |||| || |||| |||| | || |||
Sbjct 2974 AACTTAACGCCCTATTCAGACTCGCTTT-CGCTTCGGCTCCG--ATTCTGAAAATCTTAA 2918
Query 189 CCAC-----TGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243
|| | ||| ||| ||| | |||||| ||||||| |||| |||||| |
Sbjct 2917 CCTCGCTTGTGACCGTAACTCGTAGGATCATTATGCAAAAGGCACGCCGTCACCATATCG 2858
Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCC---CTCTC 300
||| |||| || ||||||| || |||||||||||| ||| |||||| | |||||
Sbjct 2857 CATGG-CTCCGACCGCTTGTAGGCGTACGGTTTCAGGTTCTTTTTCACCCGGATACTCTC 2799
Query 301 CGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATT 360
|| | |||||| ||||||| |||| ||||| |||| |||||||| |||||||||||
Sbjct 2798 CGTG---CTTTTCACCTTTCCTTCACAGTACTTGTTCGCTATCGGTGTCTCAGTAGTATT 2742
Query 361 TAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||||||||| |||||| | || ||||||| ||||| | || || |||||||
Sbjct 2741 TAGCCTTGGCAGATGGTGCTGCCGAATTCAGAGGGGGTTTCACCGGCCCCCACCTACTC 2683
>seq5180
Length=100460
Score = 86.0 bits (94), Expect = 2e-14
Identities = 92/115 (80%), Gaps = 5/115 (4%)
Strand=Plus/Plus
Query 258 GCTTGTACGCATA-CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCC 316
|||||||| | | |||||||| | ||| ||| |||| | ||||| | ||||||||| |
Sbjct 62161 GCTTGTACTCTGAGCGGTTTCACGGTCT-TTTGACTCTC-TCTCCAGAGTTCTTTTCAAC 62218
Query 317 TTTCCCTCACGGTACTAGTTCACTATCGGT-CAGTCAGTAGTATTTAGCCTTGGA 370
||||||| |||||||| ||||||||||||| | || || ||||||||||| ||
Sbjct 62219 TTTCCCTTACGGTACTTGTTCACTATCGGTCCTGTGGATA-TATTTAGCCTTAGA 62272
>seq13336
Length=709859
Score = 82.4 bits (90), Expect = 2e-13
Identities = 75/91 (82%), Gaps = 3/91 (3%)
Strand=Plus/Minus
Query 258 GCTTGTACGCATA-CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCC 316
|||||||| | | |||||||| | ||| ||| |||| | ||||| | ||||||||| |
Sbjct 173468 GCTTGTACTCTGAGCGGTTTCACGGTCT-TTTGACTCTC-TCTCCAGAGTTCTTTTCAAC 173411
Query 317 TTTCCCTCACGGTACTAGTTCACTATCGGTC 347
||||||| |||||||| ||||||||||||||
Sbjct 173410 TTTCCCTTACGGTACTTGTTCACTATCGGTC 173380
>seq9717
Length=47301
Score = 78.8 bits (86), Expect = 2e-12
Identities = 81/101 (80%), Gaps = 4/101 (4%)
Strand=Plus/Plus
Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330
|||||||| | ||| ||| |||| | ||||| | ||||||||| |||||||| |||||
Sbjct 7628 CGGTTTCACGGTCT-TTTGACTCTC-TCTCCAGAGTTCTTTTCAACTTTCCCTTTCGGTA 7685
Query 331 CTAGTTCACTATCGGT-CAGTCAGTAGTATTTAGCCTTGGA 370
|| ||||||||||||| | || || ||||||||||| ||
Sbjct 7686 CTTGTTCACTATCGGTCCTGTGGATA-TATTTAGCCTTAGA 7725
>seq11482
Length=289922
Score = 77.0 bits (84), Expect = 8e-12
Identities = 81/103 (79%), Gaps = 3/103 (3%)
Strand=Plus/Minus
Query 269 TACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGG 328
|||||||| | | |||||| |||| | ||| | | || |||||| |||||||||||||
Sbjct 5102 TACGGTTTTACGTACTATTTAACTCTC-TCTTCAGAGTGCTTTTCAACTTTCCCTCACGG 5044
Query 329 TACTAGTTCACTATCGGTC-AGTCAGTAGTATTTAGCCTTGGA 370
|||| |||| ||||||||| || | | |||||||| |||||
Sbjct 5043 TACTTGTTCGCTATCGGTCTCGTTA-TGATATTTAGCTTTGGA 5002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241376512000
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