Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq11482 96.9 2e-18 >seq11482 Length=289922 Score = 96.9 bits (106), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 13430 TCCGAA-GACCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 13374 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 13373 GGCAGGGACGTAAT-CAACGCGAGCT 13349 Score = 77.0 bits (84), Expect = 2e-12 Identities = 60/69 (87%), Gaps = 2/69 (3%) Strand=Plus/Minus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 ||| ||||||||| |||| || ||||||||| ||||||||||| ||||||||||| ||| Sbjct 3839 AAGATCTCACTAAAACATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGACAG 3782 Query 104 GGACGTAAT 112 |||| |||| Sbjct 3781 GGACATAAT 3773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300749240000