Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq1447 192 1e-46
seq11737 190 4e-46
seq1 181 2e-43
seq10921 152 1e-34
>seq1447
Length=1029730
Score = 192 bits (212), Expect = 1e-46
Identities = 224/298 (75%), Gaps = 7/298 (2%)
Strand=Plus/Minus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
|||| |||||| | || |||||||| |||||| || ||||||||||||||||||||||||
Sbjct 755362 GCTGGATCAGGCTCTCACCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCT 755303
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
|| |||||||||||| ||| ||||| ||||| |||||||| || ||| |||||| |
Sbjct 755302 GGTCCGTGTCTCAGTACCAGTGTGGGGGTTCACCCTCTCAGGCCCCCTAAAGATCGTAGC 755243
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186
| ||||| || ||| ||||||| ||| |||||| ||| |||||||| || |||||
Sbjct 755242 CATGGTGAGCCGTTACCTCACCATCTAGCTAATCTTACGCATGCCCATCTCTCTCCGATA 755183
Query 187 AATCTTT--GGTC-AAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTT 243
||||||| || ||| ||| || | | || ||||| ||||||| ||||
Sbjct 755182 AATCTTTCAAATCTAAACCATG-TGGCCTAAACT---ATTATAAGGTATTAATCCACGTT 755127
Query 244 TCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCC 301
|||| | ||| || | ||||| ||||||| ||| ||||| ||||||| ||||
Sbjct 755126 TCCATGGGCTATCCCTTTGAAAAAGGTAGGTTGCATACGCGTTACGCACCCGTGCGCC 755069
>seq11737
Length=277544
Score = 190 bits (210), Expect = 4e-46
Identities = 224/300 (75%), Gaps = 11/300 (4%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
|||| |||||| | || |||||||| |||||| || ||||||||||||||||||||||||
Sbjct 221011 GCTGGATCAGGCTCTCACCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCT 221070
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
|| |||||||||||| ||| ||||| ||||| |||||||| || ||| |||||| |
Sbjct 221071 GGTCCGTGTCTCAGTACCAGTGTGGGGGTTCACCCTCTCAGGCCCCCTAAAGATCGTAGC 221130
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186
| ||||| || ||| ||||||| ||| |||||| ||| |||||||| || |||||
Sbjct 221131 CATGGTGAGCCGTTACCTCACCATCTAGCTAATCTTACGCATGCCCATCTCTCTCCGATA 221190
Query 187 AATCTTTGGTCAAA---GAATGATGCCATCCTCTGA--CATTATGCGGTATTAGCGTTCG 241
|||||| ||||| || ||| | ||| | ||||| ||||||| ||
Sbjct 221191 AATCTT---TCAAATCTAAACCATG---TGGTCTAAACTATTATAAGGTATTAATCCACG 221244
Query 242 TTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCC 301
|||||| | ||| || | ||||| ||||||| ||| ||||| ||||||| ||||
Sbjct 221245 TTTCCATGGGCTATCCCTTTGAAAAAGGTAGGTTGCATACGCGTTACGCACCCGTGCGCC 221304
>seq1
Length=2207822
Score = 181 bits (200), Expect = 2e-43
Identities = 136/160 (85%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | |||| ||||| |||| ||||||| ||| || |||||||||||||||||||||
Sbjct 514989 GGCATGGCTGGATCAGACTTTCGTCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAG 514930
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||| | || |||||||| || ||||| |||
Sbjct 514929 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCTACAGAT 514870
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160
||||| ||||||| ||| ||| | ||||||||| ||||||
Sbjct 514869 CGTCGCCTTGGTGAGCTTTTACCCCACCAACTAGCTAATC 514830
Score = 181 bits (200), Expect = 2e-43
Identities = 136/160 (85%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | |||| ||||| |||| ||||||| ||| || |||||||||||||||||||||
Sbjct 520574 GGCATGGCTGGATCAGACTTTCGTCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAG 520515
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||| | || |||||||| || ||||| |||
Sbjct 520514 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCTACAGAT 520455
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160
||||| ||||||| ||| ||| | ||||||||| ||||||
Sbjct 520454 CGTCGCCTTGGTGAGCTTTTACCCCACCAACTAGCTAATC 520415
>seq10921
Length=25804
Score = 152 bits (168), Expect = 1e-34
Identities = 215/301 (71%), Gaps = 1/301 (0%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | |||| |||| ||| || |||||| |||||| ||| |||||||||||||||||
Sbjct 722 GGCATGGCTGGGTCAGAGTTGCCTCCATTGCCCAATATTCCCTACTGCTGCCTCCCGTAG 663
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||| ||||||| ||| ||||| | | |||||||| | ||| |||
Sbjct 662 GAGTCTGGCCCGTATCTCAGTGCCAGTGTGGGGGATACTCCTCTCAGAGCCCCTAAGGAT 603
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
||| | |||||| || ||| || |||||||| |||||| ||| ||||||||
Sbjct 602 CGTAGCCTTGGTAAGCCGTTACCTTACCAACTAGCTAATCCTACGCATGCCCATCTACAT 543
Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240
| |||||| ||| || | |||||||| | | |||||||||| |||
Sbjct 542 CCTATAAATATTTCAATAATCTACGATGCCAT-AAATTATATTATGCGGTGTTAATCCCA 484
Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300
|||||| | | ||| || || ||| ||||||| ||| ||||| ||||||| |||
Sbjct 483 GTTTCCTAGGGCTATCCCCCTGATGTAGGTAGGTTGCATACGCGTTACGCACCCGTTCGC 424
Query 301 C 301
|
Sbjct 423 C 423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 998220288000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |