Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq11482 98.7 1e-18 >seq11482 Length=289922 Score = 98.7 bits (108), Expect = 1e-18 Identities = 105/134 (78%), Gaps = 6/134 (4%) Strand=Plus/Minus Query 7 TAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCT--AATGTATTC 64 ||||||||||||||||| | || |||||||| ||||||||||||| || || || Sbjct 12594 TAGAAACCAACAAAATAAGATCGTGA-TCCTATTCCATTATTCCATGCTGCAACGT--TC 12538 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124 || |||||||||||||||||||| ||||||||| |||||||||| | || | | Sbjct 12537 AAGCATAAGCCTGCTTTGAACACTCCGATTTTCTCACAGTAAAAGTCCCGAACTCTACAC 12478 Query 125 ACA-CCAATGAAGG 137 ||| ||||| |||| Sbjct 12477 ACACCCAATTAAGG 12464 Score = 82.4 bits (90), Expect = 9e-14 Identities = 87/111 (78%), Gaps = 3/111 (3%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||| |||||||| ||||| || | || |||| |||||||||||| ||| ||| Sbjct 3004 TCTA-AAACCAACGAAATAAAATCG-AGATCTTATTTCATTATTCCATGC-AATATATAT 2948 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115 |||| |||||||||| | ||||||||||||||||| ||||| || |||| Sbjct 2947 AGGCGAGAGCCTGCTTTTAGCACTCTAATTTTCTCAAAGTAAACGTTCTGG 2897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595096212000