Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq11482 98.7 1e-18
>seq11482
Length=289922
Score = 98.7 bits (108), Expect = 1e-18
Identities = 105/134 (78%), Gaps = 6/134 (4%)
Strand=Plus/Minus
Query 7 TAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCT--AATGTATTC 64
||||||||||||||||| | || |||||||| ||||||||||||| || || ||
Sbjct 12594 TAGAAACCAACAAAATAAGATCGTGA-TCCTATTCCATTATTCCATGCTGCAACGT--TC 12538
Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124
|| |||||||||||||||||||| ||||||||| |||||||||| | || | |
Sbjct 12537 AAGCATAAGCCTGCTTTGAACACTCCGATTTTCTCACAGTAAAAGTCCCGAACTCTACAC 12478
Query 125 ACA-CCAATGAAGG 137
||| ||||| ||||
Sbjct 12477 ACACCCAATTAAGG 12464
Score = 82.4 bits (90), Expect = 9e-14
Identities = 87/111 (78%), Gaps = 3/111 (3%)
Strand=Plus/Minus
Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64
|||| |||||||| ||||| || | || |||| |||||||||||| ||| |||
Sbjct 3004 TCTA-AAACCAACGAAATAAAATCG-AGATCTTATTTCATTATTCCATGC-AATATATAT 2948
Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115
|||| |||||||||| | ||||||||||||||||| ||||| || ||||
Sbjct 2947 AGGCGAGAGCCTGCTTTTAGCACTCTAATTTTCTCAAAGTAAACGTTCTGG 2897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595096212000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |