Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq2224 187 6e-45 >seq2224 Length=1872321 Score = 187 bits (206), Expect = 6e-45 Identities = 286/401 (71%), Gaps = 15/401 (4%) Strand=Plus/Minus Query 3 ATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTTGA 62 |||||||||| ||||| ||||| | ||||| |||| || || |||||||||||| Sbjct 1316131 ATGGTCAGCAGATCGCCACCCACTTCCGTCCAGGCCAAACCGACCACTTGACCGACTTGA 1316072 Query 63 TCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGGAG 122 | || |||||| | || || | | ||||| || || ||||||| | |||| Sbjct 1316071 TTGGTCTTCTCGGCACGACCAAAGTCGTACTTGCGAACACCCAGGAAGTCGTTCAGGTTT 1316012 Query 123 TCGGCCGTGACCTTCACCGAGAAGCGTT---TTTCCAGC-GCATGTTCCTTGACCGCCTT 178 ||| |||| ||| |||| | || | | | ||| | ||| |||||||| |||| Sbjct 1316011 TCGTCCGTCACCACCACCTTGCCGCTGTAGGTCTTGAGCTGAATGC-CCTTGACCACCTT 1315953 Query 179 GCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGTA 238 |||||||||||| | || || |||||| || || || || || |||||||||||||| Sbjct 1315952 GCGGCAGATCTTGGAGACCTCGCGCTCGAGCGAGCGAACGCCTGCCTCGCGGGTGTAGTA 1315893 Query 239 GCGGACGATGTCGCGGATCGTGCCGACTT--CAAATTCGATCTCGCCCTTCTTCAGGCC- 295 ||||| |||| |||| || | | |||| | | ||| || || | ||||| ||| Sbjct 1315892 GCGGATGATGCCGCGAATGGCG--GACTCAGCCACTTCCATTTCTTCGGGCTTCACGCCG 1315835 Query 296 --ATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCT 353 |||||| | ||||||||| | ||||| ||| |||| | ||| |||||| Sbjct 1315834 TTATTGGCGGCT---TGCTTGGGCAACAAATACTTCTGGGCAATGTGCAGCTTTTCGTCT 1315778 Query 354 TCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 |||||||| |||| ||||||||||||||||||||||||||| Sbjct 1315777 TCGGTGTAGCCCGACAGGCGAATCACTTCCATCCGGTCCAG 1315737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158191488000