Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq2224 163 8e-38 >seq2224 Length=1872321 Score = 163 bits (180), Expect = 8e-38 Identities = 282/406 (69%), Gaps = 19/406 (5%) Strand=Plus/Plus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 |||||| | || ||| ||| || ||||| | ||| || || || |||||||| |||||| Sbjct 669117 ATCAGGTAGACCTCAGAGGCCCCAGCGCCCAAGGCTGACTCGCGAATGGCACGGCGCTCC 669176 Query 63 ACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTG 122 ||||||||||| ||| || |||||||| | | || ||||| |||| || | | | Sbjct 669177 ACCTGGGTGGAGCCGCAGGGCACGCAGATGATGATCCGGGGGCTAGGCTTGAGCA--CCG 669234 Query 123 TTTTCG--TGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGG 180 || |||||| | |||||||| | || ||||||| ||| || ||||||||| Sbjct 669235 AGCGCGGATGAACCATTTTGATGAACTGCTTGAGCATCTGCTCAGTCACCGTGAAGTCGG 669294 Query 181 CGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCA 240 ||||||||||||| ||||| || || ||||| | ||||| ||||| ||| |||| Sbjct 669295 CGATCACGCCGTCCTTCATGGGGCGGATGGCTTCGATATTTCCTGGCACTTTGCCCAGCA 669354 Query 241 TGCGCTTGGCCTCGGTGCCGACGGCAACGA--CACTTTT-----CTG-----ATTACCAT 288 || |||||| || ||| ||||| || ||||| ||| | ||| Sbjct 669355 TGGCCTTGGCTTCATGGCCTACGGCTTGGATGGTCTTTTTGCCGCTGGGGCCACCCTCAT 669414 Query 289 GGGTCCGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAA 348 || || |||| || ||||| ||||| | || || || || | ||||| || | Sbjct 669415 GG---CGGATGGAGACCACCGAAGGCTCGTCCAACACAATGCCTTTGCCACGCACATAGA 669471 Query 349 TAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAA 394 | ||||||||||| || ||||||||||||| ||||| |||| || Sbjct 669472 TCAGGGTGTTGGCGGTACCCAGGTCAATGGCCAGATCAGTGGAGAA 669517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353356352000