Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq14174 208 2e-51
seq1 152 1e-34
seq13487 141 2e-31
seq11737 116 9e-24
seq1447 116 9e-24
seq10921 105 2e-20
>seq14174
Length=3265
Score = 208 bits (230), Expect = 2e-51
Identities = 300/409 (73%), Gaps = 18/409 (4%)
Strand=Plus/Minus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
||||||||| | || ||||||||||||| ||||||| |||| || ||| | | | |
Sbjct 1305 CGACTACGCGTTTCCGCCTCGCCTTAGGTCCCGACTAACCCTCCGCGGACGAGCCTTCCG 1246
Query 61 CTGGAACCCTT-GGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCC 118
||||||||| |||| || | | | |||||| |||| | ||||||||| |||
Sbjct 1245 GAGGAACCCTTAGGATT-TCAGGGCATTGGATTCTCACCAATGTTTGCGCTACTCAAGCC 1187
Query 119 TGCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACA 176
|||||||||| ||| || ||||| || | | | ||||| | ||| |
Sbjct 1186 GACATTCTCACTTCCGCTTCG--TCCAC-ACCTGCTTTCGCTAATGCTTCTC-ACTACAA 1131
Query 177 CG--ACGCTCCCCTACCCAA----CCACACAGGT-TGCCACAGCTTCGGCGGATAACTTA 229
|| ||||||||||||| | | | | | | | |||||||||||| | | ||||
Sbjct 1130 CGGAACGCTCCCCTACCGATATATCGATAGACATATCCCACAGCTTCGGTACACACCTTA 1071
Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCA 289
|||||| | |||| ||||||| | | | ||||||||||||||||||||||||||||| |
Sbjct 1070 -GCCCCGTT-CATTTTCGGCGCAGGAGCGCTTGACCAGTGAGCTATTACGCACTCTTTTA 1013
Query 290 AGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCAC 349
|||||||||||||| | || |||||||||||||||| ||| |||| |||||| |||
Sbjct 1012 AGGATGGCTGCTTCTAGGCAAACCTCCTGGTTGTCTTTGCACTCCCACCTCCTTTATCAC 953
Query 350 TGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398
|||| | || ||| ||||||||| || ||||||||||||||||||
Sbjct 952 TGAGGTGTGATTTGGGGACCTTAGCTGGTGGTCTGGGCTGTTTCCCTCT 904
>seq1
Length=2207822
Score = 152 bits (168), Expect = 1e-34
Identities = 286/408 (70%), Gaps = 22/408 (5%)
Strand=Plus/Minus
Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63
|||||| | || ||||||||||||| ||||||||||| || || ||| | | |
Sbjct 518191 CTACGCATCTCTGCCTCGCCTTAGGGGCCGACTCACCCTACGCCGATGAACGTTGCGTAG 518132
Query 64 GAACCCTTG-GATAATCGGCGGACGGGATTCCCACCCG-TCACACGCTACTCATGCCTGC 121
||| ||||| | | | ||||| ||| || ||||| | |||||||||||| | ||
Sbjct 518131 GAAACCTTGCGCTTA-CGGCGAGGGGGCTTTTCACCCCCTTTAACGCTACTCATGTCAGC 518073
Query 122 ATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGA 179
|||| |||| | || | ||||| || || |||| || |||| | || ||| |
Sbjct 518072 ATTCGCACTTCTGAT-ACCTCCAGCAGACC-TCACGATCCACCTTCGCAGGCTTACAGAA 518015
Query 180 CGCTCCCCTACCCAACCACACAGGTTGCCA-----CAGCTTCGGCGGATAACT---TAAG 231
||||| |||||| | | | || | ||||||||| ||||| | ||
Sbjct 518014 CGCTCTCCTACCACTTGCTATTGCTAGCAAATCCGCAGCTTCGG----TAACTGGCTTAG 517959
Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291
||||| ||||| || |||| | | ||| || |||||||||||||||| ||||| ||
Sbjct 517958 CCCCGTTACATCTTCCGCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAAAT 517899
Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351
| |||||||||| |||||||| ||||| ||| | || |||| || |||||||||
Sbjct 517898 GGTGGCTGCTTCTAAGCCAACATCCTGACTGTTTTAGCCTTCCCACTTCGTTTCCCACTT 517839
Query 352 AGTCACCACTTAGGGG-CCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398
|| || | || |||| ||||||||| | |||||| |||||||||||
Sbjct 517838 AGCCA--ATTTTGGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 517793
>seq13487
Length=4875
Score = 141 bits (156), Expect = 2e-31
Identities = 281/405 (69%), Gaps = 16/405 (4%)
Strand=Plus/Minus
Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63
|||||| | || ||||||||||||| |||||| |||| || || ||| | | |
Sbjct 2272 CTACGCATTTCTGCCTCGCCTTAGGGGCCGACTAACCCTACGCCGATGAACGTTGCGTAG 2213
Query 64 GAACCCTTGGATAATCGGCGGACGGGATTCCCACCC-GTCACACGCTACTCATGCCTGCA 122
||| |||||| ||||| | | | ||| | || ||||||||||| | |||
Sbjct 2212 GAAACCTTGGGCTTACGGCGACAGAGCCTTTCACTCTGTTTATCGCTACTCATGTCAGCA 2153
Query 123 TTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGAC 180
||| |||| | || | ||||| || | | || || |||| | || ||| ||
Sbjct 2152 TTCGCACTTCTGAT-ACCTCCAGCATGCTTT-ACAACACACCTTCGCAGGCTTACAGAAC 2095
Query 181 GCTCCCCTACC-CAACCACACAGGTTGCCA----CAGCTTCGGCGGATAACT--TAAGCC 233
||||||||||| || ||| || || ||||||||| || || | ||||
Sbjct 2094 GCTCCCCTACCACATACACTTGCGTGTACATCCGCAGCTTCGGT---TATCTGCTTAGCC 2038
Query 234 CCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA 293
||| ||||| || |||| | | ||| || |||||||||||||||| ||||| ||||
Sbjct 2037 CCGTTACATCTTCCGCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAAAGGG 1978
Query 294 TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAG 353
|||||||||| |||||||||||||| ||| | || |||| || ||| ||||| ||
Sbjct 1977 TGGCTGCTTCTAAGCCAACCTCCTGACTGTTTTAGCCTTCCCACTTCGTTTTCCACTTAG 1918
Query 354 TCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398
|| |||||| ||||||||| | |||||| |||||||||||
Sbjct 1917 -CAGATATTAGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 1874
>seq11737
Length=277544
Score = 116 bits (128), Expect = 9e-24
Identities = 164/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 181 GCTCCCCTACCCAACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCCCGCTAC 240
|||||||||||||| || ||| | |||||||| |||| | ||||||
Sbjct 218222 GCTCCCCTACCCAAGATTACTC-TTGACTAAGCTTCGGTACTATACTTTATGCCCGCTT- 218279
Query 241 ATTATCGGCGCG-GAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA-TGGCT 298
||||||| || | | || |||||||||||| ||||||||||||| || || |||||
Sbjct 218280 ATTATCGATGCCCGCCCCGCTCGACCAGTGAGCTGTTACGCACTCTTTAAATGAATGGCT 218339
Query 299 GCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTC--CCACTGAGTCA 356
|||||||||||||| |||| | |||| | |||| | || | ||| | ||| ||
Sbjct 218340 GCTTCCAAGCCAACATCCTAGCTGTCAATGCAATCCAACCGCGTTTTTTCAACTTAGCAT 218399
Query 357 CCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
|| || ||| |||||||||||| |||||| | |||||||||||
Sbjct 218400 ACATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCCTCTCG 218443
>seq1447
Length=1029730
Score = 116 bits (128), Expect = 9e-24
Identities = 164/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 181 GCTCCCCTACCCAACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCCCGCTAC 240
|||||||||||||| || ||| | |||||||| |||| | ||||||
Sbjct 758151 GCTCCCCTACCCAAGATTACTC-TTGACTAAGCTTCGGTACTATACTTTATGCCCGCTT- 758094
Query 241 ATTATCGGCGCG-GAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA-TGGCT 298
||||||| || | | || |||||||||||| ||||||||||||| || || |||||
Sbjct 758093 ATTATCGATGCCCGCCCCGCTCGACCAGTGAGCTGTTACGCACTCTTTAAATGAATGGCT 758034
Query 299 GCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTC--CCACTGAGTCA 356
|||||||||||||| |||| | |||| | |||| | || | ||| | ||| ||
Sbjct 758033 GCTTCCAAGCCAACATCCTAGCTGTCAATGCAATCCAACCGCGTTTTTTCAACTTAGCAT 757974
Query 357 CCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
|| || ||| |||||||||||| |||||| | |||||||||||
Sbjct 757973 ACATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCCTCTCG 757930
>seq10921
Length=25804
Score = 105 bits (116), Expect = 2e-20
Identities = 160/223 (72%), Gaps = 5/223 (2%)
Strand=Plus/Minus
Query 181 GCTCCCCTACCCAACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCCCGCTAC 240
|||||||||||||| || ||| | |||||||| |||| | ||||||
Sbjct 3506 GCTCCCCTACCCAAGATTACTC-TTGACTAAGCTTCGGTACTATACTTTATGCCCGCTT- 3449
Query 241 ATTATCGGCGCG-GAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTG 299
||||||| || | | || |||||||||||| ||||||||||||| || ||| ||||
Sbjct 3448 ATTATCGATGCCCGCCCCGCTCGACCAGTGAGCTGTTACGCACTCTTTAAATGATTGCTG 3389
Query 300 CTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTT--TCCCACTGAGTCAC 357
||||||||| ||| |||||| ||||| ||| || ||||| | | ||| |||
Sbjct 3388 CTTCCAAGCAAACATCCTGGCTGTCTCGGCAGTCAGACTTCCTTTGTTCAACTTAGTATA 3329
Query 358 CACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
| || | | ||||||||| | |||||| | |||||||||||
Sbjct 3328 GATTTGGAGACCTTAGCTGTAGTTCTGGGTTCTTTCCCTCTCG 3286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177388032000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |