Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq1 223 3e-56
seq11737 129 5e-28
seq1447 129 5e-28
seq10921 118 9e-25
>seq1
Length=2207822
Score = 223 bits (246), Expect = 3e-56
Identities = 146/161 (91%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||||| | ||||||||||||| ||||||||||| |||||||||||||
Sbjct 515907 TCGAGTTGCAGACTGCGATCCGGACTACGACCGGTTTTCTGGGATTGGCTCCCCCTCGCG 515848
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 515847 GGTTGGCAGCCCTCTGTACCGGCCATTGTATGACGTGTGTAGCCCTACCCATAAGGGCCA 515788
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||||||| |||||||||||||||||||||||||||||||||
Sbjct 515787 TGAGGACCTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 515747
>seq11737
Length=277544
Score = 129 bits (142), Expect = 5e-28
Identities = 125/158 (79%), Gaps = 2/158 (1%)
Strand=Plus/Plus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||||| ||||||| ||| || | |||| | ||| || | |||||||
Sbjct 220095 TCGAGTTGCAGACTCCAATCCGAACTGAGACAGGCTTTGAAG-ATTCGCATCACCTCGCG 220153
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || |||||||||| | ||||||||| ||||||| ||||| | | ||||||||
Sbjct 220154 GTGTAGCTGCCCTCTGTACCTGCCATTGTATCACGTGTGTAGCCCAAGGCGTAAGGGCCG 220213
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTG 157
||| ||||||||||| |||||||||||||| | |||||
Sbjct 220214 TGATGACTTGACGTCGTCCCCACCTTCCTCTCAGTTTG 220251
>seq1447
Length=1029730
Score = 129 bits (142), Expect = 5e-28
Identities = 125/158 (79%), Gaps = 2/158 (1%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||||| ||||||| ||| || | |||| | ||| || | |||||||
Sbjct 756278 TCGAGTTGCAGACTCCAATCCGAACTGAGACAGGCTTTGAAG-ATTCGCATCACCTCGCG 756220
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || |||||||||| | ||||||||| ||||||| ||||| | | ||||||||
Sbjct 756219 GTGTAGCTGCCCTCTGTACCTGCCATTGTATCACGTGTGTAGCCCAAGGCGTAAGGGCCG 756160
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTG 157
||| ||||||||||| |||||||||||||| | |||||
Sbjct 756159 TGATGACTTGACGTCGTCCCCACCTTCCTCTCAGTTTG 756122
>seq10921
Length=25804
Score = 118 bits (130), Expect = 9e-25
Identities = 116/150 (77%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
||||||||||||| ||||||| ||| |||| |||| || |||| ||| | || |
Sbjct 1637 TCGAGTTGCAGACCCCAATCCGAACTGTGATAGGCTTTTTGTGATTCGCTTACTCTTACA 1578
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || || ||||||| |||||||||| ||||||| |||||| | |||||||||
Sbjct 1577 AGCTCGCTGCACTCTGTACCTACCATTGTAGCACGTGTGTCGCCCTAGGCGTAAGGGCCA 1518
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC 150
||| ||| ||||||| ||||| ||||||||
Sbjct 1517 TGATGACCTGACGTCGTCCCCTCCTTCCTC 1488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415927460000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |