Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq13487 190 1e-46
seq1 167 2e-39
seq11737 145 5e-33
seq1447 145 5e-33
seq10921 132 3e-29
seq14174 100 2e-19
>seq13487
Length=4875
Score = 190 bits (210), Expect = 1e-46
Identities = 126/140 (90%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||
Sbjct 3370 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGTCCTG 3311
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||||| |||||| | |||| ||||||| |||||||| ||| ||||||||||||||
Sbjct 3310 CTTTCGCACCTGCTCGACTTGTCAGTCTCGCAGTCAAGCACGCTTATGCCATTGCACTAT 3251
Query 121 CACTACGATTTCCGACCGTA 140
|| |||||| ||||||||||
Sbjct 3250 CAGTACGATGTCCGACCGTA 3231
>seq1
Length=2207822
Score = 167 bits (184), Expect = 2e-39
Identities = 121/140 (86%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
||||||||||||||||||||||||||||||||| || | ||||||||||||| || |||
Sbjct 519243 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTTTGTCCTA 519184
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||| | |||||| | |||| ||||||| |||||||| ||| ||||| ||||||||
Sbjct 519183 CTTTCGTACCTGCTCGACTTGTCAGTCTCGCAGTCAAGCACGCTTATGCCAATGCACTAT 519124
Query 121 CACTACGATTTCCGACCGTA 140
|| ||||||||||||||||
Sbjct 519123 CAACACGATTTCCGACCGTA 519104
>seq11737
Length=277544
Score = 145 bits (160), Expect = 5e-33
Identities = 116/140 (83%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||| |||||||||||||||||||| | | |||||||||||||||| ||||
Sbjct 217075 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTATGTCCTG 217134
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||||| |||||| | |||| | |||| || ||||||| ||| ||||||| |||| |
Sbjct 217135 CTTTCGCACCTGCTCGACTTGTAGGTCTCACAGTCAAGCATCCTTATGCCATTACACTCT 217194
Query 121 CACTACGATTTCCGACCGTA 140
||||||| || |||||
Sbjct 217195 ACGTACGATTACCATCCGTA 217214
>seq1447
Length=1029730
Score = 145 bits (160), Expect = 5e-33
Identities = 116/140 (83%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||| |||||||||||||||||||| | | |||||||||||||||| ||||
Sbjct 759298 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTATGTCCTG 759239
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||||| |||||| | |||| | |||| || ||||||| ||| ||||||| |||| |
Sbjct 759238 CTTTCGCACCTGCTCGACTTGTAGGTCTCACAGTCAAGCATCCTTATGCCATTACACTCT 759179
Query 121 CACTACGATTTCCGACCGTA 140
||||||| || |||||
Sbjct 759178 ACGTACGATTACCATCCGTA 759159
>seq10921
Length=25804
Score = 132 bits (146), Expect = 3e-29
Identities = 115/140 (82%), Gaps = 2/140 (1%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||| |||||||||||||||||||| || | ||||||||||||||| |||
Sbjct 4652 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATATCCTA 4593
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119
|||||| | ||| || | ||||| ||||||| |||||| | ||||||| |||||||| |
Sbjct 4592 CTTTCGTACCTGTTCGACTTGTTTGTCTCGCAGTCAAGCTCCCTTTTGCTATTGCACTCA 4533
Query 120 TCACTACGATTTCCGACCGT 139
|| | ||| || || | |||
Sbjct 4532 TCGC-ACGGTTACCAAGCGT 4514
>seq14174
Length=3265
Score = 100 bits (110), Expect = 2e-19
Identities = 93/118 (79%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| ||| |||||| |||| ||| |||||||||| ||||
Sbjct 2334 TAACTTTTATCCGTTGAGCGACGGCACTTCCACTCATTGCCGTCGGATCACTAAGACCGT 2275
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||| |||||| |||||| ||||| || |||||| ||| |||| |||||||
Sbjct 2274 GTTTCCACCCTGCTCGAGTTGTCACTCTCACAGTCAAGCTTCCTTATGCCTTTGCACT 2217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351940600000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |