Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq13487 210 2e-52 seq1 183 3e-44 seq11737 127 2e-27 seq1447 127 2e-27 seq10921 122 8e-26 >seq13487 Length=4875 Score = 210 bits (232), Expect = 2e-52 Identities = 140/156 (90%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 3358 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGTCCTGCTTTCGCACCTG 3299 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| |||||||||||||| |||||||||||||||||| | |||||||| Sbjct 3298 CTCGACTTGTCAGTCTCGCAGTCAAGCACGCTTATGCCATTGCACTATCAGTACGATGTC 3239 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| ||||| ||||||| |||||||||||| Sbjct 3238 CGACCGTACTTAGCGTACCTTCGAGCTCCTCCGTTA 3203 >seq1 Length=2207822 Score = 183 bits (202), Expect = 3e-44 Identities = 134/156 (86%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| |||||||||||||||||| || ||| |||||| ||||| Sbjct 519231 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTTTGTCCTACTTTCGTACCTG 519172 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| |||||||||||||| |||||||||| ||||||| | |||||| || Sbjct 519171 CTCGACTTGTCAGTCTCGCAGTCAAGCACGCTTATGCCAATGCACTATCAACACGATTTC 519112 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| ||||| ||||||| ||||||||||| Sbjct 519111 CGACCGTATTTAGCGTACCTTCGAACTCCTCCGTTA 519076 >seq11737 Length=277544 Score = 127 bits (140), Expect = 2e-27 Identities = 91/105 (87%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 |||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| Sbjct 217088 TTGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTATGTCCTGCTTTCGCACCTGC 217147 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 |||| || |||| ||||||||| ||||||||||| |||| Sbjct 217148 TCGACTTGTAGGTCTCACAGTCAAGCATCCTTATGCCATTACACT 217192 >seq1447 Length=1029730 Score = 127 bits (140), Expect = 2e-27 Identities = 91/105 (87%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 |||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| Sbjct 759285 TTGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTATGTCCTGCTTTCGCACCTGC 759226 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 |||| || |||| ||||||||| ||||||||||| |||| Sbjct 759225 TCGACTTGTAGGTCTCACAGTCAAGCATCCTTATGCCATTACACT 759181 >seq10921 Length=25804 Score = 122 bits (134), Expect = 8e-26 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 |||||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||| Sbjct 4639 TTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATATCCTACTTTCGTACCTGT 4580 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCC 144 |||| || |||||||||||||| ||| ||| |||||||| | | |||| | || Sbjct 4579 TCGACTTGTTTGTCTCGCAGTCAAGCTCCCTTTTGCTATTGCACTCATCGCACGGTTACC 4520 Query 145 GACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | |||| | || ||||| | ||||||||| Sbjct 4519 AAGCGTGCTGAGGAAACCTTTGAAAGCCTCCGTTA 4485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473517416000