Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01001946.1
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
seq13487 210 2e-52
seq1 183 3e-44
seq11737 127 2e-27
seq1447 127 2e-27
seq10921 122 8e-26
>seq13487
Length=4875
Score = 210 bits (232), Expect = 2e-52
Identities = 140/156 (90%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3358 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGTCCTGCTTTCGCACCTG 3299
Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143
||||| |||| |||||||||||||| |||||||||||||||||| | ||||||||
Sbjct 3298 CTCGACTTGTCAGTCTCGCAGTCAAGCACGCTTATGCCATTGCACTATCAGTACGATGTC 3239
Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179
||||||| ||||| ||||||| ||||||||||||
Sbjct 3238 CGACCGTACTTAGCGTACCTTCGAGCTCCTCCGTTA 3203
>seq1
Length=2207822
Score = 183 bits (202), Expect = 3e-44
Identities = 134/156 (86%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||||||||||||||| |||||||||||||||||| || ||| |||||| |||||
Sbjct 519231 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTTTGTCCTACTTTCGTACCTG 519172
Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143
||||| |||| |||||||||||||| |||||||||| ||||||| | |||||| ||
Sbjct 519171 CTCGACTTGTCAGTCTCGCAGTCAAGCACGCTTATGCCAATGCACTATCAACACGATTTC 519112
Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179
||||||| ||||| ||||||| |||||||||||
Sbjct 519111 CGACCGTATTTAGCGTACCTTCGAACTCCTCCGTTA 519076
>seq11737
Length=277544
Score = 127 bits (140), Expect = 2e-27
Identities = 91/105 (87%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84
|||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||
Sbjct 217088 TTGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTATGTCCTGCTTTCGCACCTGC 217147
Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129
|||| || |||| ||||||||| ||||||||||| ||||
Sbjct 217148 TCGACTTGTAGGTCTCACAGTCAAGCATCCTTATGCCATTACACT 217192
>seq1447
Length=1029730
Score = 127 bits (140), Expect = 2e-27
Identities = 91/105 (87%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84
|||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||
Sbjct 759285 TTGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTATGTCCTGCTTTCGCACCTGC 759226
Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129
|||| || |||| ||||||||| ||||||||||| ||||
Sbjct 759225 TCGACTTGTAGGTCTCACAGTCAAGCATCCTTATGCCATTACACT 759181
>seq10921
Length=25804
Score = 122 bits (134), Expect = 8e-26
Identities = 120/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84
|||||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||
Sbjct 4639 TTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATATCCTACTTTCGTACCTGT 4580
Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCC 144
|||| || |||||||||||||| ||| ||| |||||||| | | |||| | ||
Sbjct 4579 TCGACTTGTTTGTCTCGCAGTCAAGCTCCCTTTTGCTATTGCACTCATCGCACGGTTACC 4520
Query 145 GACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179
| |||| | || ||||| | |||||||||
Sbjct 4519 AAGCGTGCTGAGGAAACCTTTGAAAGCCTCCGTTA 4485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 473517416000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |