Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq10921 300 2e-79
seq11737 297 3e-78
seq1447 297 3e-78
seq13487 271 1e-70
seq14174 268 1e-69
seq1 244 2e-62
seq11726 129 9e-28
>seq10921
Length=25804
Score = 300 bits (332), Expect = 2e-79
Identities = 231/274 (84%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61
|||| ||| ||| ||||||||| |||||| ||||||| ||| |||||||| | | |
Sbjct 4987 GAGGTGGGTTTCACACTTAGATGCTTTCAGCGTTTATCCCGTCCCGACTTAGCTACTCTG 4928
Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121
| ||| ||||||| ||||| | | |||||| ||| ||||| ||||||||||||||
Sbjct 4927 CCGTGCCCTTGGCAAGACAACAGATACACCAGCGGTCAGTCCAATTCGGTCCTCTCGTAC 4868
Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181
||| ||| ||||||||| ||||||||||||| || |||||||||||||||||||| |
Sbjct 4867 TAAAATCAGAGCCTCTCAAACTTCCTACGCCCACCACAGATAGGGACCGAACTGTCTCAC 4808
Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241
|||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||
Sbjct 4807 GACGTTCTGAACCCAGCTCGCGTGCCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 4748
Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
| || ||||||||||||| |||||||||||||||
Sbjct 4747 TTCTCCAGCCCCAGGATGTGACGAGCCGACATCG 4714
>seq11737
Length=277544
Score = 297 bits (328), Expect = 3e-78
Identities = 229/272 (84%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCT 63
|| ||| |||| |||| |||| ||||| ||||||| | ||| || ||||| | ||||
Sbjct 216742 GGTGGGTTTCGCACTTATATGCTTTCAGTGCTTATCCTTGCCAGACGTAGCTACTCAGCG 216801
Query 64 ATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTA 123
||||| |||| | ||||||| | |||||||||| |||||| | ||||||||||||||||
Sbjct 216802 GTGCACCTGGCGGCACAACTGATACACCAGAGGTCTGTCCAACACGGTCCTCTCGTACTA 216861
Query 124 AGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGA 183
| ||| ||| |||||| ||| |||||| | ||||| |||||||||||||| |||
Sbjct 216862 GAGTCAGATCCACTCAAACTTCTCACGCCCGCTGTAGATAGAGACCGAACTGTCTCACGA 216921
Query 184 CGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTA 243
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 216922 CGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACCCTTGGGACCTT 216981
Query 244 CTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| ||||||||||||| |||||||||||||||
Sbjct 216982 CTCCAGCCCCAGGATGTGACGAGCCGACATCG 217013
>seq1447
Length=1029730
Score = 297 bits (328), Expect = 3e-78
Identities = 229/272 (84%), Gaps = 0/272 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCT 63
|| ||| |||| |||| |||| ||||| ||||||| | ||| || ||||| | ||||
Sbjct 759631 GGTGGGTTTCGCACTTATATGCTTTCAGTGCTTATCCTTGCCAGACGTAGCTACTCAGCG 759572
Query 64 ATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTA 123
||||| |||| | ||||||| | |||||||||| |||||| | ||||||||||||||||
Sbjct 759571 GTGCACCTGGCGGCACAACTGATACACCAGAGGTCTGTCCAACACGGTCCTCTCGTACTA 759512
Query 124 AGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGA 183
| ||| ||| |||||| ||| |||||| | ||||| |||||||||||||| |||
Sbjct 759511 GAGTCAGATCCACTCAAACTTCTCACGCCCGCTGTAGATAGAGACCGAACTGTCTCACGA 759452
Query 184 CGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTA 243
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 759451 CGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACCCTTGGGACCTT 759392
Query 244 CTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| ||||||||||||| |||||||||||||||
Sbjct 759391 CTCCAGCCCCAGGATGTGACGAGCCGACATCG 759360
>seq13487
Length=4875
Score = 271 bits (300), Expect = 1e-70
Identities = 216/260 (83%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75
|||||||||| |||||| ||||| ||||| | |||||| ||| || |||| ||||
Sbjct 3691 GCTTAGATGCTTTCAGCGTTTATCTCTTCCGTATTTAGCTACCCGGCAATGCCACTGGCG 3632
Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135
||||| ||| |||||||| | |||||| ||||||||||||||||| | ||||| ||
Sbjct 3631 TGACAACCGGTACACCAGAGATACGTCCATTCCGGTCCTCTCGTACTAGGAACAGCCCCC 3572
Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195
|||||||||| ||||||||| | |||||||||| ||||||||| ||||||| | |||||
Sbjct 3571 TTCAAATTTCCAACGCCCACGGCAGATAGGGACCAAACTGTCTCACGACGTTTTAAACCC 3512
Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255
||||| ||| ||||||||| ||||||||||| |||||||||||| || |||||||||
Sbjct 3511 AGCTCACGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTACAGCCCCAG 3452
Query 256 GATGAGACGAGCCGACATCG 275
||||||| ||||||||||||
Sbjct 3451 GATGAGATGAGCCGACATCG 3432
>seq14174
Length=3265
Score = 268 bits (296), Expect = 1e-69
Identities = 225/275 (82%), Gaps = 1/275 (0%)
Strand=Plus/Minus
Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61
|||| ||||||| ||||||||| |||||| |||||| ||| |||| ||| ||| |
Sbjct 2670 GAGGTGGGCTTCCCACTTAGATGCTTTCAGCGGTTATCCGCTCCGCACTTGGCTACCCTG 2611
Query 62 C-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120
| | | | |||||| | ||| ||| |||||| ||| || | ||||||||||||||||
Sbjct 2610 CGTTTACCGTTGGCACGATAACAGGTACACCAGCGGTGCGTTCTTCCCGGTCCTCTCGTA 2551
Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180
||||||| |||||||||| ||||||||| | |||||| |||||||||||||||
Sbjct 2550 CTAAGGAAGACTCCTCTCAATGCTCCTACGCCTGCACCGGATATGGACCGAACTGTCTCA 2491
Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240
|||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||
Sbjct 2490 CGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 2431
Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|||| | |||||||| || || ||||||||||||
Sbjct 2430 GTACTACCGCCCCAGGTTGCGATGAGCCGACATCG 2396
>seq1
Length=2207822
Score = 244 bits (270), Expect = 2e-62
Identities = 210/260 (81%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75
|||||||||| |||||| ||||| ||||| |||||||| | | || |||| ||||||
Sbjct 519564 GCTTAGATGCTTTCAGCGGTTATCTCTTCCGCACTTAGCTACTCGGCAATGCCATTGGCA 519505
Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135
||||| | | |||||| ||| ||||| ||||||||||||||||| | ||| ||
Sbjct 519504 TGACAACCGATACACCAGCGGTGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGGCTCT 519445
Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195
||||| || | |||||||| |||||||||| ||||||||| ||||||| | |||||
Sbjct 519444 CTCAATCTTGCAGCGCCCACGGAAGATAGGGACCAAACTGTCTCACGACGTTTTAAACCC 519385
Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255
||||| ||| ||||||||| ||||||||||| |||||||||||| || |||||||||
Sbjct 519384 AGCTCACGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTACAGCCCCAG 519325
Query 256 GATGAGACGAGCCGACATCG 275
||||||| ||||||||||||
Sbjct 519324 GATGAGATGAGCCGACATCG 519305
>seq11726
Length=335128
Score = 129 bits (142), Expect = 9e-28
Identities = 128/166 (77%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCT 63
|| ||| |||| |||| |||| ||||| ||||||| | ||| || ||||| | ||||
Sbjct 40454 GGTGGGTTTCGCACTTATATGCTTTCAGTGCTTATCCTTGCCAGACGTAGCTACTCAGCG 40395
Query 64 ATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTA 123
||||| |||| | ||||||| | |||||||||| |||||| | ||||||||||||||||
Sbjct 40394 GTGCACCTGGCGGCACAACTGATACACCAGAGGTCTGTCCAACACGGTCCTCTCGTACTA 40335
Query 124 AGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACC 169
| ||| ||| |||||| ||| |||||| | ||||| ||||
Sbjct 40334 GAGTCAGATCCACTCAAACTTCTCACGCCCGCTGTAGATAGAGACC 40289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780663848000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |