Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01002055.1
Length=294
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 8e-29
seq1447 86.0 1e-14
>seq1
Length=2207822
Score = 132 bits (146), Expect = 8e-29
Identities = 124/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 137 GCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGT 196
|||||||||| || || ||||| ||||||||||| |||||||||||||| ||| | | ||
Sbjct 1970638 GCTTCATGCGCTTCTTGCCGGCTTTTTGCTTCTCCAGCAGCTTGCGCTTGCGGGTGATGT 1970697
Query 197 CACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAA 256
| || ||||||||||| ||||| ||||| || | || ||||||| | || || |
Sbjct 1970698 CGCCACCGTAGCATTTTGCCAGCACGTTTTTGCGCAGCGCCTTGATGTTCTCGCGGGCGA 1970757
Query 257 TGATCTGCCCGCCAATGGCGGCCTGGATCGCGACGTCG 294
|||| | | ||||||||||||||||| || ||||||
Sbjct 1970758 TGATGTTGGCCCCAATGGCGGCCTGGATGGCCACGTCG 1970795
>seq1447
Length=1029730
Score = 86.0 bits (94), Expect = 1e-14
Identities = 137/193 (71%), Gaps = 3/193 (2%)
Strand=Plus/Minus
Query 93 ACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCT-TCATGCGTTTTT 151
||||| | ||||||||| | ||||||| || || || ||||| |||| |||| |||||||
Sbjct 247546 ACCGCCATGAAGGCTTCCT-GTGGAATCTCTACATTCCCCAC-CGCTCTCATACGTTTTT 247489
Query 152 TACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATT 211
| || || || || || || || || | ||| | | | ||| || ||||| ||||
Sbjct 247488 TTCCTTTTTTCTGTTTTTCGAGTAGTTTTCTCTTTCTGGAAATGTCTCCTCCGTAACATT 247429
Query 212 TGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAA 271
||||| ||||| |||| || || |||| || | || |||| | | | || |
Sbjct 247428 TGGCCGTTACGTCTTTTCGAAGGGCTTTGATGGTTTCTCTGGCGATGAATTTCGCACCGA 247369
Query 272 TGGCGGCCTGGAT 284
|||||||||||||
Sbjct 247368 TGGCGGCCTGGAT 247356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 838249088000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |