Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01002110.1 Length=382 Score E Sequences producing significant alignments: (Bits) Value seq1 120 7e-25 >seq1 Length=2207822 Score = 120 bits (132), Expect = 7e-25 Identities = 176/255 (69%), Gaps = 23/255 (9%) Strand=Plus/Plus Query 151 TGACTTCCAGCATGCGTGCCAGGTTCTCGGCGCGCTCCAGGTAACGCGACATCCAATACA 210 |||| |||| ||||||||| ||| ||||||||||| | ||| ||||||||||| ||| Sbjct 1363406 TGACATCCAACATGCGTGCGGTGTTTTCGGCGCGCTCGATGTAGCGCGACATCCAGAACA 1363465 Query 211 GATCTGCAGCTGTTCTACGCAGCAT-----------------------ACTCAGCCCTCC 247 || | || ||||| || ||| | |||| | ||| Sbjct 1363466 AATGGTCGGCGGTTCTTGACAACATGTTTATTCTCCTAAGGACCGCTGATTCAGTCTTCC 1363525 Query 248 ACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTTCC 307 | |||||||||||| ||||| ||||||||||| || || || |||| || |||||| Sbjct 1363526 AACACCCAGGTGTCTTTGGTGCCACCGCCTTGGCTGGAATTCACCACCAAGGAACCTTCC 1363585 Query 308 TTCAGCGCCACGCGGGTCAAGCCACCGGGCACCAGGCGGGTTTCCTTGCCCGAGAGCACG 367 || || ||||| ||||||| || || ||||||| | ||||||||||||||| Sbjct 1363586 TTGAGAGCCACCCGGGTCAGCCCGCCAGGCACCATCTGCACCGACTTGCCCGAGAGCACA 1363645 Query 368 AAGGGTCGCAAGTCG 382 ||||| |||| |||| Sbjct 1363646 AAGGGGCGCAGGTCG 1363660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1119798400000