Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq1 354 2e-95
seq11737 194 4e-47
seq1447 194 4e-47
seq10921 183 7e-44
>seq1
Length=2207822
Score = 354 bits (392), Expect = 2e-95
Identities = 327/411 (80%), Gaps = 10/411 (2%)
Strand=Plus/Minus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
||||||||||||||||||||||| ||||||||||||||| ||||| ||| || |||||
Sbjct 515020 TTTACAACCCGAAGGCCTTCTTCCCGCACGCGGCATGGCTGGATCAGACTTTCGTCCATT 514961
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
|| ||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 514960 GTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 514901
Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184
|||||||| ||||||||||||||||| ||||||||||| |||| || ||||||| |||
Sbjct 514900 GGCTGGTCGTCCTCTCAGACCAGCTACAGATCGTCGCCTTGGTGAGCTTTTACCCCACCA 514841
Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTT-G 243
||||||||||| | | || ||| |||| |||||| | | |||||| ||||
Sbjct 514840 ACTAGCTAATCTGACATCGGCCGCTCCAATAGCGAGAGGTCTTGCGATCCCCCCCTTTCA 514781
Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGC 303
||| | || |||||||||||| | |||| || |||||||| | | |||
Sbjct 514780 CCCTTAGGTCG-TATGCGGTATTAATCCGGCTTTCGCCGGGCTATCCCCCACTACTGGGC 514722
Query 304 AGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCT 363
| |||| | | |||||||||||| ||||||||||| || || | ||| |
Sbjct 514721 ACGTTCCGATGCTTTACTCACCCGTTCGCCACTCGTC-GC-------CAGGTTGCCCCGC 514670
Query 364 GTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 514669 GTTACCGTTCGACTTGCATGTGTAAGGCATGCCGCCAGCGTTCAATCTGAG 514619
Score = 354 bits (392), Expect = 2e-95
Identities = 327/411 (80%), Gaps = 10/411 (2%)
Strand=Plus/Minus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
||||||||||||||||||||||| ||||||||||||||| ||||| ||| || |||||
Sbjct 520605 TTTACAACCCGAAGGCCTTCTTCCCGCACGCGGCATGGCTGGATCAGACTTTCGTCCATT 520546
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
|| ||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 520545 GTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 520486
Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184
|||||||| ||||||||||||||||| ||||||||||| |||| || ||||||| |||
Sbjct 520485 GGCTGGTCGTCCTCTCAGACCAGCTACAGATCGTCGCCTTGGTGAGCTTTTACCCCACCA 520426
Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTT-G 243
||||||||||| | | || ||| |||| |||||| | | |||||| ||||
Sbjct 520425 ACTAGCTAATCTGACATCGGCCGCTCCAATAGCGAGAGGTCTTGCGATCCCCCCCTTTCA 520366
Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGC 303
||| | || |||||||||||| | |||| || |||||||| | | |||
Sbjct 520365 CCCTTAGGTCG-TATGCGGTATTAATCCGGCTTTCGCCGGGCTATCCCCCACTACTGGGC 520307
Query 304 AGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCT 363
| |||| | | |||||||||||| ||||||||||| || || | ||| |
Sbjct 520306 ACGTTCCGATGCTTTACTCACCCGTTCGCCACTCGTC-GC-------CAGGTTGCCCCGC 520255
Query 364 GTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 520254 GTTACCGTTCGACTTGCATGTGTAAGGCATGCCGCCAGCGTTCAATCTGAG 520204
>seq11737
Length=277544
Score = 194 bits (214), Expect = 4e-47
Identities = 159/192 (83%), Gaps = 1/192 (1%)
Strand=Plus/Plus
Query 5 TTTACAACCCGAAGG-CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63
||||||| || ||| || ||||| | ||||||| ||||||| |||||||| | |||||
Sbjct 220973 TTTACAATCCATAGGACCGTCTTCCTCCACGCGGGATGGCTGGATCAGGCTCTCACCCAT 221032
Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123
||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 221033 TGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTG 221092
Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183
||| | ||| |||||||| || ||| |||||| ||| |||| ||| ||||| | ||
Sbjct 221093 TGGGGGTTCACCCTCTCAGGCCCCCTAAAGATCGTAGCCATGGTGAGCCGTTACCTCACC 221152
Query 184 AACTAGCTAATC 195
| ||||||||||
Sbjct 221153 ATCTAGCTAATC 221164
>seq1447
Length=1029730
Score = 194 bits (214), Expect = 4e-47
Identities = 159/192 (83%), Gaps = 1/192 (1%)
Strand=Plus/Minus
Query 5 TTTACAACCCGAAGG-CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63
||||||| || ||| || ||||| | ||||||| ||||||| |||||||| | |||||
Sbjct 755400 TTTACAATCCATAGGACCGTCTTCCTCCACGCGGGATGGCTGGATCAGGCTCTCACCCAT 755341
Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123
||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 755340 TGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTG 755281
Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183
||| | ||| |||||||| || ||| |||||| ||| |||| ||| ||||| | ||
Sbjct 755280 TGGGGGTTCACCCTCTCAGGCCCCCTAAAGATCGTAGCCATGGTGAGCCGTTACCTCACC 755221
Query 184 AACTAGCTAATC 195
| ||||||||||
Sbjct 755220 ATCTAGCTAATC 755209
>seq10921
Length=25804
Score = 183 bits (202), Expect = 7e-44
Identities = 157/193 (81%), Gaps = 1/193 (1%)
Strand=Plus/Minus
Query 5 TTTACAACCCGAAGG-CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63
||||||| || ||| || ||||| | ||||||||||||||| |||| |||| ||||
Sbjct 754 TTTACAATCCAGAGGACCGTCTTCCTGCACGCGGCATGGCTGGGTCAGAGTTGCCTCCAT 695
Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123
|| |||||||||| ||||||||||||||||||||||||| |||| ||||||| ||||||
Sbjct 694 TGCCCAATATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGCCCGTATCTCAGTGCCAGTG 635
Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183
||| | | |||||||||| | ||| ||||||| |||| ||| ||| ||||| ||
Sbjct 634 TGGGGGATACTCCTCTCAGAGCCCCTAAGGATCGTAGCCTTGGTAAGCCGTTACCTTACC 575
Query 184 AACTAGCTAATCC 196
|||||||||||||
Sbjct 574 AACTAGCTAATCC 562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1222179968000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |