Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq1 315 2e-83
seq11737 280 4e-73
seq1447 279 2e-72
seq10921 251 2e-64
>seq1
Length=2207822
Score = 315 bits (348), Expect = 2e-83
Identities = 279/354 (79%), Gaps = 26/354 (7%)
Strand=Plus/Plus
Query 163 GTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTG 222
||| ||||||||||||||| ||||| ||| ||||||||||||||| ||||| | |||
Sbjct 514826 GTCAGATTAGCTAGTTGGTGGGGTAAAAGCTCACCAAGGCGACGATCTGTAGCTGGTCTG 514885
Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282
||||| || | |||||| ||| |||||||||||| ||| ||||||||||||||||||||
Sbjct 514886 AGAGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAG 514945
Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342
|||||||| ||| ||||||| | |||| ||||| |||| | |||||||| | || |||||
Sbjct 514946 TGGGGAATTTTGGACAATGGACGAAAGTCTGATCCAGCCATGCCGCGTGCGGGAAGAAGG 515005
Query 343 CCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATA------------------------ 378
||||||||| ||||| | || | ||| |||||| |
Sbjct 515006 CCTTCGGGTTGTAAACCGCTTTTGTCAGGGAAGAAATCCTTTGAGCTAATACCTCGGGGG 515065
Query 379 -ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437
|||||||||| ||| || |||| |||||||||||||||||||||||||||||||||||
Sbjct 515066 GATGACGGTACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 515125
Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTT 491
||||| || ||||||| |||||||||| |||||||||| ||||| ||| ||||
Sbjct 515126 TAGGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTT 515178
Score = 315 bits (348), Expect = 2e-83
Identities = 279/354 (79%), Gaps = 26/354 (7%)
Strand=Plus/Plus
Query 163 GTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTG 222
||| ||||||||||||||| ||||| ||| ||||||||||||||| ||||| | |||
Sbjct 520411 GTCAGATTAGCTAGTTGGTGGGGTAAAAGCTCACCAAGGCGACGATCTGTAGCTGGTCTG 520470
Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282
||||| || | |||||| ||| |||||||||||| ||| ||||||||||||||||||||
Sbjct 520471 AGAGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAG 520530
Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342
|||||||| ||| ||||||| | |||| ||||| |||| | |||||||| | || |||||
Sbjct 520531 TGGGGAATTTTGGACAATGGACGAAAGTCTGATCCAGCCATGCCGCGTGCGGGAAGAAGG 520590
Query 343 CCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATA------------------------ 378
||||||||| ||||| | || | ||| |||||| |
Sbjct 520591 CCTTCGGGTTGTAAACCGCTTTTGTCAGGGAAGAAATCCTTTGAGCTAATACCTCGGGGG 520650
Query 379 -ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437
|||||||||| ||| || |||| |||||||||||||||||||||||||||||||||||
Sbjct 520651 GATGACGGTACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 520710
Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTT 491
||||| || ||||||| |||||||||| |||||||||| ||||| ||| ||||
Sbjct 520711 TAGGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTT 520763
>seq11737
Length=277544
Score = 280 bits (310), Expect = 4e-73
Identities = 364/501 (73%), Gaps = 24/501 (5%)
Strand=Plus/Minus
Query 21 AGAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATAC 80
||| ||||| ||||||| ||||||||| | ||||| || | | || | ||||| | |
Sbjct 221309 AGACCGGCGCACGGGTGCGTAACGCGTATGCAACCTACCTTTTTCAAAGGGATAGCCCAT 221250
Query 81 CGAAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTC 140
|||| || |||||| |||||| || | | |||||| | | | |||| |
Sbjct 221249 GGAAACGTGGATTAATACCTTATAATAGT-TTAGACCACATGGTTTAGATTTGAAAGATT 221191
Query 141 CGGCGGTACAG-GATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAA 199
||| | || ||| | | |||| |||||||||| |||| ||||||||||| ||||
Sbjct 221190 TATCGG-AGAGAGATGGGCATGCGTAAGATTAGCTAGATGGTGAGGTAACGGCTCACCAT 221132
Query 200 GGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTC 259
||| |||||| ||| | ||||||||||||| | ||||| ||| |||||||||||| |
Sbjct 221131 GGCTACGATCTTTAGGGGGCCTGAGAGGGTGAACCCCCACACTGGTACTGAGACACGGAC 221072
Query 260 CAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAG 319
|| |||||||||||||||||||||| ||||||||| |||||||| | |||||||| |||
Sbjct 221071 CAGACTCCTACGGGAGGCAGCAGTGAGGAATATTGGACAATGGGTGAGAGCCTGATCCAG 221012
Query 320 CAACGCCGCGTGAGCGATGAAGG-CCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATA 378
| | ||||||| || || || ||| || | ||||| || | | ||||||| |
Sbjct 221011 CCATCCCGCGTGGAGGAAGACGGTCCTATGGATTGTAAACTCCTTTTATATAGGAAGAAA 220952
Query 379 -------------------ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCC 419
|||||||||| | || |||| |||||||||| ||||||
Sbjct 220951 CGCCAGTACGTGTACTGGTCTGACGGTACTATATGAATAAGCACCGGCTAACTCCGTGCC 220892
Query 420 AGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGT 479
|||||||||||||||||| |||| || ||||||||||||| ||| | ||| ||||||||
Sbjct 220891 AGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTTA-TTGGGTTTAAAGGGT 220833
Query 480 GCGTAGGTGGTTTCTTAAGTC 500
||||||||| | ||||||
Sbjct 220832 CCGTAGGTGGGCTTGTAAGTC 220812
>seq1447
Length=1029730
Score = 279 bits (308), Expect = 2e-72
Identities = 365/503 (73%), Gaps = 28/503 (6%)
Strand=Plus/Plus
Query 21 AGAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATAC 80
||| ||||| ||||||| ||||||||| | ||||| || | | || | ||||| | |
Sbjct 755064 AGACCGGCGCACGGGTGCGTAACGCGTATGCAACCTACCTTTTTCAAAGGGATAGCCCAT 755123
Query 81 CGAAAGGTATGCTAATACGAGATAATATACTTTTAT--CGCATGGTAGAAGTATCAAAGC 138
|||| || |||||| |||||| |||| | |||||| | | | ||||
Sbjct 755124 GGAAACGTGGATTAATACCTTATAATAG---TTTAGGCCACATGGTTTAGATTTGAAAGA 755180
Query 139 TCCGGCGGTACAG-GATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACC 197
| ||| | || ||| | | |||| |||||||||| |||| ||||||||||| |||
Sbjct 755181 TTTATCGG-AGAGAGATGGGCATGCGTAAGATTAGCTAGATGGTGAGGTAACGGCTCACC 755239
Query 198 AAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGG 257
| ||| |||||| ||| | ||||||||||||| | ||||| ||| ||||||||||||
Sbjct 755240 ATGGCTACGATCTTTAGGGGGCCTGAGAGGGTGAACCCCCACACTGGTACTGAGACACGG 755299
Query 258 TCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGC 317
||| |||||||||||||||||||||| ||||||||| |||||||| | |||||||| |
Sbjct 755300 ACCAGACTCCTACGGGAGGCAGCAGTGAGGAATATTGGACAATGGGTGAGAGCCTGATCC 755359
Query 318 AGCAACGCCGCGTGAGCGATGAAGG-CCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA 376
||| | ||||||| || || || ||| || | ||||| || | | |||||||
Sbjct 755360 AGCCATCCCGCGTGGAGGAAGACGGTCCTATGGATTGTAAACTCCTTTTATATAGGAAGA 755419
Query 377 TA-------------------ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTG 417
| |||||||||| | || |||| |||||||||| ||||
Sbjct 755420 AACGCCAGTACGTGTACTGGTCTGACGGTACTATATGAATAAGCACCGGCTAACTCCGTG 755479
Query 418 CCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGG 477
|||||||||||||||||||| |||| || ||||||||||||| ||| | ||| ||||||
Sbjct 755480 CCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTTA-TTGGGTTTAAAGG 755538
Query 478 GTGCGTAGGTGGTTTCTTAAGTC 500
|| ||||||||| | ||||||
Sbjct 755539 GTCCGTAGGTGGGCTTGTAAGTC 755561
>seq10921
Length=25804
Score = 251 bits (278), Expect = 2e-64
Identities = 273/362 (75%), Gaps = 25/362 (7%)
Strand=Plus/Plus
Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220
|||| |||||||||||||||||||||||||||||||||||| |||||| ||| | |
Sbjct 557 GCGTAGGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCTACGATCCTTAGGGGCTC 616
Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280
||||||| ||| ||||| ||| ||||||| |||| ||| ||||||||||||||||||
Sbjct 617 TGAGAGGAGTATCCCCCACACTGGCACTGAGATACGGGCCAGACTCCTACGGGAGGCAGC 676
Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340
||| |||||||||| |||||| || |||| |||| | |||||||| || ||
Sbjct 677 AGTAGGGAATATTGGGCAATGGAGGCAACTCTGACCCAGCCATGCCGCGTGCAGGAAGAC 736
Query 341 GG-CCTTCGGGTCGTAAAGCTCTGTCCTCAA--GGAAGA-------------------TA 378
|| ||| || | ||||| || | | || |||||| ||
Sbjct 737 GGTCCTCTGGATTGTAAACTGCTTT--TGAATGGGAAGAATGTGCGGCTTGCGAGCTGTA 794
Query 379 ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 438
|||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct 795 ATGACGGTACCATTAGAATAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 854
Query 439 AGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498
||| ||| ||||||||||||| ||| | ||| ||||||||||||||| || || ||||
Sbjct 855 AGGTGGCGAGCGTTATCCGGATTTA-TTGGGTTTAAAGGGTGCGTAGGCGGCTTAATAAG 913
Query 499 TC 500
||
Sbjct 914 TC 915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497330432000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |