Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq1 340 4e-91
seq11737 309 7e-82
seq1447 309 7e-82
seq10921 291 2e-76
>seq1
Length=2207822
Score = 340 bits (376), Expect = 4e-91
Identities = 289/354 (82%), Gaps = 4/354 (1%)
Strand=Plus/Plus
Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60
||| ||| || |||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 515074 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 515133
Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120
||||||| |||||||||||||||||||| ||||| ||| |||| |||| |||||||
Sbjct 515134 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTATGTAAGACAGAGGT 515193
Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAG--GA 178
|||| | ||||||||| || ||||| |||| |||||| ||| |||||| | ||
Sbjct 515194 GAAATCCCCGGGCTCAACCTGGGAACTGCCTTTGTGACTGCATAGCTTGAGTGCGGCAGA 515253
Query 179 GGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGT 238
|||| | ||||||||| ||||||| ||||||||||||||||| ||||||||||| |
Sbjct 515254 GGGGGA--TGGAATTCCGCGTGTAGCAGTGAAATGCGTAGATATGCGGAGGAACACCGAT 515311
Query 239 GGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAAC 298
||||||||| |||| | |||||| || | || ||||||||||||||||||||
Sbjct 515312 GGCGAAGGCAATCCCCTGGGCCTGCACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 515371
Query 299 AGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGG 352
|||||||||||||||||||||||||||| ||||||||| ||| | ||| |||
Sbjct 515372 AGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTGGTTGTTGGG 515425
Score = 340 bits (376), Expect = 4e-91
Identities = 289/354 (82%), Gaps = 4/354 (1%)
Strand=Plus/Plus
Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60
||| ||| || |||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 520659 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 520718
Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120
||||||| |||||||||||||||||||| ||||| ||| |||| |||| |||||||
Sbjct 520719 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTATGTAAGACAGAGGT 520778
Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAG--GA 178
|||| | ||||||||| || ||||| |||| |||||| ||| |||||| | ||
Sbjct 520779 GAAATCCCCGGGCTCAACCTGGGAACTGCCTTTGTGACTGCATAGCTTGAGTGCGGCAGA 520838
Query 179 GGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGT 238
|||| | ||||||||| ||||||| ||||||||||||||||| ||||||||||| |
Sbjct 520839 GGGGGA--TGGAATTCCGCGTGTAGCAGTGAAATGCGTAGATATGCGGAGGAACACCGAT 520896
Query 239 GGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAAC 298
||||||||| |||| | |||||| || | || ||||||||||||||||||||
Sbjct 520897 GGCGAAGGCAATCCCCTGGGCCTGCACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 520956
Query 299 AGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGG 352
|||||||||||||||||||||||||||| ||||||||| ||| | ||| |||
Sbjct 520957 AGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTGGTTGTTGGG 521010
>seq11737
Length=277544
Score = 309 bits (342), Expect = 7e-82
Identities = 308/397 (78%), Gaps = 8/397 (2%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| |||||||||| |||||||||||||||||||||||| |||| || |||||||||||
Sbjct 220913 AAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCG 220854
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|| ||| |||| |||||||| ||||||||| | |||||||| |||||||| |||| |
Sbjct 220853 GATTTATTGGGTTTAAAGGGTCCGTAGGTGGGCTTGTAAGTCAGTGGTGAAAGCCTATCG 220794
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192
|| ||| | ||||| |||| ||||| | || ||||| | | | | ||||
Sbjct 220793 CTTAACGATAGAACTGCCATTGATACTGCTAGCCTTGAGTGAGTTTGAAGTAGCTAGAAT 220734
Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252
||||||||||||||||||| ||||||||| ||| ||| | |||||||| | ||
Sbjct 220733 ATGTAGTGTAGCGGTGAAATGCATAGATATTACATAGAATACCGATTGCGAAGGCAGGTT 220674
Query 253 GCTG-GACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311
|| |||| |||||||||||| | |||||||||||||||| ||||||||||||||||
Sbjct 220673 ACTAAGACTC-AACTGACACTGATGGACGAAAGCGTGGGGAGCGAACAGGATTAGATACC 220615
Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTG 371
||||||||||||||||||||||||| ||||| | ||| || | | | | |||
Sbjct 220614 CTGGTAGTCCACGCCGTAAACGATGTATACTCGCTGTTGG------AATTTATTTCAGTG 220561
Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| ||| || | |||||||| ||||||||||||||
Sbjct 220560 GCTAAGCGAAAGTGATAAGTATACCACCTGGGGAGTA 220524
>seq1447
Length=1029730
Score = 309 bits (342), Expect = 7e-82
Identities = 308/397 (78%), Gaps = 8/397 (2%)
Strand=Plus/Plus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| |||||||||| |||||||||||||||||||||||| |||| || |||||||||||
Sbjct 755460 AAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCG 755519
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|| ||| |||| |||||||| ||||||||| | |||||||| |||||||| |||| |
Sbjct 755520 GATTTATTGGGTTTAAAGGGTCCGTAGGTGGGCTTGTAAGTCAGTGGTGAAAGCCTATCG 755579
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192
|| ||| | ||||| |||| ||||| | || ||||| | | | | ||||
Sbjct 755580 CTTAACGATAGAACTGCCATTGATACTGCTAGCCTTGAGTGAGTTTGAAGTAGCTAGAAT 755639
Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252
||||||||||||||||||| ||||||||| ||| ||| | |||||||| | ||
Sbjct 755640 ATGTAGTGTAGCGGTGAAATGCATAGATATTACATAGAATACCGATTGCGAAGGCAGGTT 755699
Query 253 GCT-GGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311
|| |||| |||||||||||| | |||||||||||||||| ||||||||||||||||
Sbjct 755700 ACTAAGACT-CAACTGACACTGATGGACGAAAGCGTGGGGAGCGAACAGGATTAGATACC 755758
Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTG 371
||||||||||||||||||||||||| ||||| | ||| || | | | | |||
Sbjct 755759 CTGGTAGTCCACGCCGTAAACGATGTATACTCGCTGTTGG------AATTTATTTCAGTG 755812
Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| ||| || | |||||||| ||||||||||||||
Sbjct 755813 GCTAAGCGAAAGTGATAAGTATACCACCTGGGGAGTA 755849
>seq10921
Length=25804
Score = 291 bits (322), Expect = 2e-76
Identities = 307/398 (77%), Gaps = 7/398 (2%)
Strand=Plus/Plus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 814 AAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTATCCG 873
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|| ||| |||| ||||||||||||||| || || |||||| | ||| ||| | |
Sbjct 874 GATTTATTGGGTTTAAAGGGTGCGTAGGCGGCTTAATAAGTCGGTGGTTAAAAGTAGCAG 933
Query 133 CTCAACCCCGGGAC-TGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAA 191
|| ||| || ||| | || |||| | ||| ||| | |||| | |||
Sbjct 934 CTTAACTGTTTTACATGCCATCGATACTGTTGAGCTTGAGATATTTGGAGGCAGCTAGAA 993
Query 192 TTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCT 251
|| | ||||||||||||||||| |||||| | ||||| ||| | |||||||| | |
Sbjct 994 TTTCCGGTGTAGCGGTGAAATGCATAGATACCGGAAGGAATACCGATTGCGAAGGCAGGT 1053
Query 252 TGCT-GGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATAC 310
|||| || | ||||||| |||| || |||||||||||||| |||||||||||||||||
Sbjct 1054 TGCTACGAAT-AAACTGACGCTGATGCACGAAAGCGTGGGGATCAAACAGGATTAGATAC 1112
Query 311 CCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGT 370
||||||||||||||||||||||||||| |||||| ||| ||| | ||| || | ||
Sbjct 1113 CCTGGTAGTCCACGCCGTAAACGATGATTACTAGTTGTTGGG--GTTTAA--GCCTCAGT 1168
Query 371 GCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | || || | ||||||| |||||||||||||||
Sbjct 1169 GACCAAGGGAAACCGATAAGTAATCCACCTGGGGAGTA 1206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1202983424000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |