Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq1 536 4e-150
seq13487 480 3e-133
seq11737 398 3e-108
seq1447 398 3e-108
seq10921 365 2e-98
seq14174 242 1e-61
>seq1
Length=2207822
Score = 536 bits (594), Expect = 4e-150
Identities = 423/498 (85%), Gaps = 13/498 (3%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60
|||||||||| |||||| | |||||||||||||||||||||||||| |||||||| ||||
Sbjct 517456 CGAGTCCGAATAGGGCGTCTAGTCGCTGGGTGTAGACCCGAAACCAGGTGATCTATCCAT 517515
Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120
||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||
Sbjct 517516 GGCCAGGATGAAGGTGCGGTAACACGCACTGGAGGTCCGAACCGACTAGTGTTGCAAAAC 517575
Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180
||| ||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||
Sbjct 517576 TAGCGGATGAGCTGTGGATAGGGGTGAAAGGCTAAACAAACCTGGAGATAGCTGGTTCTC 517635
Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGG 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 517636 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATTACCATCGGGGGTAGAGCACTGTTATGG 517695
Query 241 CTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTACC 300
|||||||||||| ||||||||||||||||||||||||||||||| | || || |||
Sbjct 517696 CTAGGGGGTCATGGCGACTTACCAAACCATTGCAAACTCCGAATACCGATGAG---TACA 517752
Query 301 GC--GGGAGTGAGGGCA-TGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357
|| ||||| || ||| ||||||||| ||||| | | ||||| || || || |||
Sbjct 517753 GCTTGGGAGACAGAGCACCGGGTGCTAACGTCCGGACTCAAGAGGGAAACAACCCAGACC 517812
Query 358 ATCAGCTAAGG-CCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416
||||||||| |||| |||| ||||||| | |||||||| || ||||| ||
Sbjct 517813 GCCAGCTAAGGTCCCCAAAAT--TGGCTAAGTGGGA--AACGAAGTGGGAAGGCTAAAAC 517868
Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476
|| ||||||||||||| |||||||||| |||||||||| |||||| |||||||| |
Sbjct 517869 AGTCAGGATGTTGGCTTAGAAGCAGCCA-CCATTTAAAGAAAGCGTAATAGCTCACTGAT 517927
Query 477 CGAGGAGTCGGGCGTGGA 494
|||| ||| ||| |||
Sbjct 517928 CGAGTCGTCCTGCGCGGA 517945
>seq13487
Length=4875
Score = 480 bits (532), Expect = 3e-133
Identities = 408/495 (82%), Gaps = 7/495 (1%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60
|||||||||| |||||| | |||||||||||||||||||||||||| ||||||| ||||
Sbjct 1537 CGAGTCCGAATAGGGCGTCTAGTCGCTGGGTGTAGACCCGAAACCAGATGATCTATCCAT 1596
Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120
||||||| ||||||| |||||||| ||||||| ||||||||||||| |||||||| |
Sbjct 1597 GGCCAGGTTGAAGGTTGGGTAACACCAACTGGAGGACCGAACCCACTAACGTTGAAAAGT 1656
Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180
||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 1657 TAGGGGATGAGCTGTGGATAGGGGTGAAAGGCTAAACAAATCTGGAAATAGCTGGTTCTC 1716
Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGG 240
||||||||||||||||||||||||| ||| |||| | |||||||||||||||||||||
Sbjct 1717 CCCGAAAACTATTTAGGTAGTGCCTCGAGTCTCACTACAGGGGGTAGAGCACTGTTATGG 1776
Query 241 CTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTACC 300
|||||||||||| ||||||||||||||||| ||||||||||||| | | ||| | |
Sbjct 1777 CTAGGGGGTCATCGCGACTTACCAAACCATGGCAAACTCCGAATACCTGTAAGTGCAATC 1836
Query 301 GCGGGAGTGAGGGCAT-GGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTAT 359
|||||| | | ||| ||||||||| ||||| | ||||| || || || |||
Sbjct 1837 TCGGGAGACA-GACATCGGGTGCTAACGTCCGGTGTCAAGAGGGAAACAACCCAGACCGC 1895
Query 360 CAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGC 419
||||||||| ||| ||| | ||||||| || |||||||| || ||||| ||||
Sbjct 1896 CAGCTAAGGTCCC-TAATATCTGCTAAGTGGAA--AACGAAGTGGGAAGGCTAAAACAGT 1952
Query 420 TAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGA 479
|||| |||||||| |||||||||| | |||||||| |||||| |||||||| ||||
Sbjct 1953 CAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGCGTAATAGCTCACTGATCGA 2011
Query 480 GGAGTCGGGCGTGGA 494
| ||| ||| |||
Sbjct 2012 GTCGTCCTGCGCGGA 2026
>seq11737
Length=277544
Score = 398 bits (440), Expect = 3e-108
Identities = 413/531 (78%), Gaps = 9/531 (2%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGACA--GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59
|||||| ||| ||||||| | || |||| ||||| ||||||| ||||||||||||
Sbjct 218779 CGAGTCTGAATAGGGCGAAATAGTTAGTGGGATTAGACGCGAAACCGTGTGATCTACCCA 218720
Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119
||| |||| ||||| || |||||||| | |||||| ||||||| | | ||||||||
Sbjct 218719 TGGGCAGGTTGAAGCTGTGGTAACACACAGTGGAGGACCGAACCAGTTGACGTTGAAAAG 218660
Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179
| |||||| ||||||||||||||||||||| || |||||| |||||||||| || ||
Sbjct 218659 TCTTTGGATGACCTGTGGGTAGGGGTGAAAGGCCAATCAAACTCGGAAATAGCTCGTACT 218600
Query 180 CTCCGAAAACTATTTAGGTAGTGC-CTCAAGTATCACCATCGGG-GGTAGAGC-ACTGTT 236
| |||||| |||||||| || |||| ||| | | | |||||||| |||| |
Sbjct 218599 CCCCGAAATGCATTTAGGTGCAGCGCTCAGGTAGAGTCTTATAGAGGTAGAGCTACTGAT 218540
Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTT 296
||| | |||| | | | | |||||| | | |||||||||||||| || || |
Sbjct 218539 -TGGATGCGGGGGCTTCACCGCCTACCAATTCCTGACAAACTCCGAATGCT-ATAAGATA 218482
Query 297 TACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356
||| | || ||||||||| ||||||||||||||| | |||||||| ||||| || |||
Sbjct 218481 TACTG-GGCAGTGAGGGCTTGGGTGCTAAGGTCCAAGTCCGAGAGGGAAAGAACCCAGAC 218423
Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416
||||||||||| ||| ||||| |||||||| || |||| || |||||| |||
Sbjct 218422 CATCAGCTAAGGTCCCCAAATGTATGCTAAGTTGAAAAAACGCGGTTGGATTGCATTGAC 218363
Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 218362 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTGGT 218303
Query 477 CGAG-GAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGC 526
|||| | | ||||| | |||||||| |||| || |||| |||||||||
Sbjct 218302 CGAGCGGGGCGGGCATCGATAATAAGCGGGCATAAAGTATAGTACCGAAGC 218252
>seq1447
Length=1029730
Score = 398 bits (440), Expect = 3e-108
Identities = 413/531 (78%), Gaps = 9/531 (2%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGACA--GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59
|||||| ||| ||||||| | || |||| ||||| ||||||| ||||||||||||
Sbjct 757594 CGAGTCTGAATAGGGCGAAATAGTTAGTGGGATTAGACGCGAAACCGTGTGATCTACCCA 757653
Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119
||| |||| ||||| || |||||||| | |||||| ||||||| | | ||||||||
Sbjct 757654 TGGGCAGGTTGAAGCTGTGGTAACACACAGTGGAGGACCGAACCAGTTGACGTTGAAAAG 757713
Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179
| |||||| ||||||||||||||||||||| || |||||| |||||||||| || ||
Sbjct 757714 TCTTTGGATGACCTGTGGGTAGGGGTGAAAGGCCAATCAAACTCGGAAATAGCTCGTACT 757773
Query 180 CTCCGAAAACTATTTAGGTAGTGC-CTCAAGTATCACCATCGGG-GGTAGAGC-ACTGTT 236
| |||||| |||||||| || |||| ||| | | | |||||||| |||| |
Sbjct 757774 CCCCGAAATGCATTTAGGTGCAGCGCTCAGGTAGAGTCTTATAGAGGTAGAGCTACTGAT 757833
Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTT 296
||| | |||| | | | | |||||| | | |||||||||||||| || || |
Sbjct 757834 -TGGATGCGGGGGCTTCACCGCCTACCAATTCCTGACAAACTCCGAATGCT-ATAAGATA 757891
Query 297 TACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356
||| | || ||||||||| ||||||||||||||| | |||||||| ||||| || |||
Sbjct 757892 TACTG-GGCAGTGAGGGCTTGGGTGCTAAGGTCCAAGTCCGAGAGGGAAAGAACCCAGAC 757950
Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416
||||||||||| ||| ||||| |||||||| || |||| || |||||| |||
Sbjct 757951 CATCAGCTAAGGTCCCCAAATGTATGCTAAGTTGAAAAAACGCGGTTGGATTGCATTGAC 758010
Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 758011 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTGGT 758070
Query 477 CGAG-GAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGC 526
|||| | | ||||| | |||||||| |||| || |||| |||||||||
Sbjct 758071 CGAGCGGGGCGGGCATCGATAATAAGCGGGCATAAAGTATAGTACCGAAGC 758121
>seq10921
Length=25804
Score = 365 bits (404), Expect = 2e-98
Identities = 409/535 (76%), Gaps = 19/535 (4%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGACA-GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60
|||||| ||| |||||| | || ||| ||||||| ||||||| ||||||||||||||
Sbjct 2951 CGAGTCTGAATAGGGCGTTAAGTTTGTGGCTGTAGACGCGAAACCTAGTGATCTACCCAT 3010
Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120
|| |||| ||||||| ||||| || ||||||| ||| ||| | |||||||| |
Sbjct 3011 GGTCAGGTTGAAGGTTGGGTAAGACCAACTGGAGGACCGTACCGGTATACGTTGAAAAGT 3070
Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180
|||||| |||||||||||||||||||||||| |||||| |||||||||| || |||
Sbjct 3071 GTTCGGATGAACTGTGGGTAGGGGTGAAAGGCTAATCAAACTGGGAAATAGCTCGTACTC 3130
Query 181 TCCGAAAACTATTTAGGTAGTGCCTCA------AGTATCACCATCGGGGGTAGAGC-ACT 233
|||||| |||||||||| || || ||| | | | | |||||||| |||
Sbjct 3131 CCCGAAATGTATTTAGGTACAGCGTCGGCGTTGAGTCTTATC----GAGGTAGAGCTACT 3186
Query 234 GTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAG 293
| | ||| | |||| | | | ||||||| ||||||||||||||| || ||
Sbjct 3187 GAT-TGGATGCGGGGGAGTCACATCCTACCAAATTCAGACAAACTCCGAATGCG-ATAAG 3244
Query 294 TTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCC- 352
| || | ||| ||||||||| ||||||||||||||| | |||||||| ||||| ||
Sbjct 3245 ATATAGC-CGGCAGTGAGGGCTCGGGTGCTAAGGTCCGGGTCCGAGAGGGAAAGAACCCA 3303
Query 353 GGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTA 412
| |||| ||||||||| | | |||| ||||||| ||| || ||||||||| |||
Sbjct 3304 GAACTA-CAGCTAAGGTCTCCAAATCTATACTAAGTTGAACAAAGGAAGTCTGACTGCCG 3362
Query 413 AGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCAC 472
||||||| |||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct 3363 AGACAGCCAGGATGTTTGCTTGGAAGCAG-CAATCATTTAAAGAGTGCGTAACAGCTCAC 3421
Query 473 TAGTCGAG-GAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGC 526
| |||||| | | ||||| | |||||||| |||| || |||| |||||||||
Sbjct 3422 TGGTCGAGCGGGGCGGGCATCGATAATAAGCGGGCATAAAGTATAGTACCGAAGC 3476
>seq14174
Length=3265
Score = 242 bits (268), Expect = 1e-61
Identities = 399/565 (71%), Gaps = 18/565 (3%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61
|||||| ||| ||||||| | || || | |||||||||| || |||||||| |||||
Sbjct 570 CGAGTCTGAATAGGGCGATAATCAGTGTTTATAGACCCGAACCCCGGTGATCTAACCATG 629
Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121
||||||||||| | |||||| |||||||||||||| || ||||||||||||
Sbjct 630 TCCAGGATGAAGCTTGAGTAACATTAAGTGGAGGTCCGAACCGACCGATGTTGAAAAATC 689
Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181
| ||||||| ||||| ||||||||||| || || | ||| ||| ||||||||||||
Sbjct 690 GGCGGATGAGGTGTGGTTAGGGGTGAAATGCCAATCGAACCGGGAGCTAGCTGGTTCTCC 749
Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATC-GGGGGTAGAGCACTGTTATGG 240
|||||| | || ||| || || || | || ||||||| ||||||| | | |
Sbjct 750 CCGAAATGTGTTGAGGCGCAGCGGTAACGATTATAGTCTGGGGGTAAAGCACTGAT-TCG 808
Query 241 CTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC- 299
| ||| | | | ||||||| | ||||||| |||| | ||| | ||
Sbjct 809 GTGCGGGCTGCGAGAGCGGTACCAAATCGAGTCAAACTCTGAAT----ACCAGATGGACA 864
Query 300 CG-CGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTA 358
|| | |||||| || | | |||| ||| | | ||||| || | || ||| |
Sbjct 865 CGTTGCCAGTGAGACGGTGAGGGATAAGCTCCATCGTCAAGAGGGAAACAGCCCAGACCA 924
Query 359 TCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAG 418
||||||||| ||| |||| ||| || ||| | | || || || || ||| ||||||
Sbjct 925 CCAGCTAAGGTCCCCAAATCACACCTCAGTGATA--AAGGAGGTGGGAGTGCAAAGACAA 982
Query 419 CTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCG 478
| |||| ||| || | |||||||||| || || ||||||||||||| |||||||| |||
Sbjct 983 CCAGGAGGTTTGCCTAGAAGCAGCCA-TCCTTAAAAGAGTGCGTAATAGCTCACTGGTCA 1041
Query 479 AGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCATT 538
|| || ||| || ||| | |||| |||| ||| ||||||||| ||||||| ||
Sbjct 1042 AGCGCTCCTGCGCCGAAAATGAACGGG-GCTAAGGTGTGTACCGAAGCTGTGGGAT-ATG 1099
Query 539 TATAT-----GATCGGTAGGGGAGC 558
| ||| ||||||||||||||
Sbjct 1100 TCTATCGATATATCGGTAGGGGAGC 1124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689295872000
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