Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq11737 370 4e-100 seq1447 370 4e-100 seq13487 367 4e-99 seq10921 343 5e-92 seq1 334 3e-89 seq14174 295 2e-77 >seq11737 Length=277544 Score = 370 bits (410), Expect = 4e-100 Identities = 428/567 (75%), Gaps = 26/567 (5%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| ||||| ||||||||| |||| ||| |||||||| | |||| || Sbjct 217148 TCGACTTGTAGGTCTCACAGTCAAGCATCCTTATGCCATTACACTCTACGTACGATTACC 217207 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | || |||||| ||||||| ||||||| ||| ||| ||||| | ||| |||||| Sbjct 217208 ATCCGTACTGAGGATACCTTTGAAAGCCTCCGATACTCTTTTGGAGG-CGACCACCCCAG 217266 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||||||||||| ||||||||| || | | ||| |||| | | Sbjct 217267 TCAAACTACCCACCACGCACTGTCCT---------TCTTTGCAGAAG-TTAGGCTCCAAA 217316 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 || || |||||||||||| | ||||||||||| || ||| ||||| ||||||| Sbjct 217317 TAAACAAAGGGTGGTATTTCAAGGATGACTCCACAACGCCTGGCGACGCCGCTTCATAGT 217376 Query 241 CTCCCACCTATCCTACACAAACCGCA-CCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 ||||||||||||||||||| | ||||| | |||||| |||||||||| ||||| | Sbjct 217377 CTCCCACCTATCCTACACATTATTTATCCGAA-GTCAATACGAAGCTATAGTAAAGGTGC 217435 Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 | |||||||||||||| | ||| | ||| ||||||| || |||| |||||||||| Sbjct 217436 ACAGGGTCTTTTCGTCCCACAGCGGGTAACCGGCATCTTCACCGATACTACAATTTCACC 217495 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | || |||||||||||| | || ||||||| |||||||||||||||||||||||| Sbjct 217496 GAGCTCATGGTTGAGACAGT-GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTAC 217554 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 217555 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCT 217614 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 ||| | | || || | || | || | ||| |||||||||||||||| Sbjct 217615 TCAGTCAAAAGCTTCTC------CGAAGATAACTTCC---TCC-CTTAACCTTCCAGCAC 217664 Query 538 CGGGCAGGCGTCAGTCCGTATACCTCG 564 |||||||| ||||| || ||||| ||| Sbjct 217665 CGGGCAGGTGTCAGGCCATATACGTCG 217691 >seq1447 Length=1029730 Score = 370 bits (410), Expect = 4e-100 Identities = 428/567 (75%), Gaps = 26/567 (5%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| ||||| ||||||||| |||| ||| |||||||| | |||| || Sbjct 759225 TCGACTTGTAGGTCTCACAGTCAAGCATCCTTATGCCATTACACTCTACGTACGATTACC 759166 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | || |||||| ||||||| ||||||| ||| ||| ||||| | ||| |||||| Sbjct 759165 ATCCGTACTGAGGATACCTTTGAAAGCCTCCGATACTCTTTTGGAGG-CGACCACCCCAG 759107 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||||||||||| ||||||||| || | | ||| |||| | | Sbjct 759106 TCAAACTACCCACCACGCACTGTCCT---------TCTTTGCAGAAG-TTAGGCTCCAAA 759057 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 || || |||||||||||| | ||||||||||| || ||| ||||| ||||||| Sbjct 759056 TAAACAAAGGGTGGTATTTCAAGGATGACTCCACAACGCCTGGCGACGCCGCTTCATAGT 758997 Query 241 CTCCCACCTATCCTACACAAACCGCA-CCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 ||||||||||||||||||| | ||||| | |||||| |||||||||| ||||| | Sbjct 758996 CTCCCACCTATCCTACACATTATTTATCCGAA-GTCAATACGAAGCTATAGTAAAGGTGC 758938 Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 | |||||||||||||| | ||| | ||| ||||||| || |||| |||||||||| Sbjct 758937 ACAGGGTCTTTTCGTCCCACAGCGGGTAACCGGCATCTTCACCGATACTACAATTTCACC 758878 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | || |||||||||||| | || ||||||| |||||||||||||||||||||||| Sbjct 758877 GAGCTCATGGTTGAGACAGT-GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTAC 758819 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 758818 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCT 758759 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 ||| | | || || | || | || | ||| |||||||||||||||| Sbjct 758758 TCAGTCAAAAGCTTCTC------CGAAGATAACTTCC---TCC-CTTAACCTTCCAGCAC 758709 Query 538 CGGGCAGGCGTCAGTCCGTATACCTCG 564 |||||||| ||||| || ||||| ||| Sbjct 758708 CGGGCAGGTGTCAGGCCATATACGTCG 758682 >seq13487 Length=4875 Score = 367 bits (406), Expect = 4e-99 Identities = 423/566 (75%), Gaps = 25/566 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACT--CACCACCTGATTG 58 ||||||||| |||||||||||||||| | ||| ||| || |||| || || ||| Sbjct 3297 TCGACTTGTCAGTCTCGCAGTCAAGCACGCTTATGCCATTGCACTATCAGTAC--GATGT 3240 Query 59 CCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCC 118 || ||| || || | ||||| | || |||||||||| ||| ||||| | ||||||| Sbjct 3239 CCGACCGTACTTAGCGTACCTTCGAGCTCCTCCGTTACTCTTTAGGAGGAGA-CCGCCCC 3181 Query 119 AGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCC 178 ||| ||||| ||||||| |||| |||||| |||||||| ||||| |||||||||| | Sbjct 3180 AGTCAAACTGCCCACCATGCACGGTCCCCGACCCAGATAATGGGTCAAGGTTAGAACCTC 3121 Query 179 ACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238 | | |||| |||||||||||| | | ||||| | ||| |||| || | ||| | Sbjct 3120 AAACAGATCAGGGTGGTATTTCAAGGATGGCTCCATGAGAACTGGCGTTCCCACTTCAAA 3061 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 | |||||||||||||||||||||||| | || ||||| | |||||| ||| ||||| Sbjct 3060 GCCTCCCACCTATCCTACACAAACCGGTTCAAAGTCCAATGCAAAGCTACAGTAAAGGTT 3001 Query 299 CC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | ||||||||| |||| |||||| | | ||||| | || ||| ||| ||| | Sbjct 3000 CATGGGGTCTTTCCGTCTAGCCGCGGGGAGATTGCATCATCACAAACACTTCAACTTCGC 2941 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | | || || ||||||| || |||||||||||||||||||||||||||||||| Sbjct 2940 TGAGTCTCAGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTAC 2881 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || Sbjct 2880 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACT 2821 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 ||||| | | || ||| ||| ||| |||| |||||||||| Sbjct 2820 TCAATCAAGAG-CTTGCACCCCA----------TCA--------TTTAATCTTCCAGCAC 2780 Query 538 CGGGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||||| ||| ||||| || Sbjct 2779 CGGGCAGGCGTCACTCCCTATACGTC 2754 >seq10921 Length=25804 Score = 343 bits (380), Expect = 5e-92 Identities = 422/568 (74%), Gaps = 29/568 (5%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| ||||||||||||||||||||| ||| || |||||| | | | || || Sbjct 4579 TCGACTTGTTTGTCTCGCAGTCAAGCTCCCTTTTGCTATTGCACTCATCGCACGGTTACC 4520 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | ||||||| |||||||| ||||||||||| ||| ||||| | ||| |||||| Sbjct 4519 AAGCGTGCTGAGGAAACCTTTGAAAGCCTCCGTTACTCTTTTGGAGG-CGACCACCCCAG 4461 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||||||||||| || ||||||| |||| || |||||| | | | Sbjct 4460 TCAAACTACCCACCAAGCGGTGTCCCC---------CATG--CCGGGGTTAGGAACCAAA 4412 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 || || ||||||||||||| | || || || || ||| ||||||||| | Sbjct 4411 TATCAAAAGGGTGGTATTTCAACGTTGGCTAAACGACGCCTGGCGACGCCGCATCAATGC 4352 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 ||||||||||||||||||| | | | | ||| | |||||||||| ||||| | Sbjct 4351 CTCCCACCTATCCTACACATCTGATATCCAGTCACAACGCTAAGCTATAGTAAAGGTTCA 4292 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAA-ACGAGCATCTTTACTCGT-ACTGCAATTTCAC 357 |||||||||| ||||| | ||| | | ||| ||||||| || ||| ||| ||||||| | Sbjct 4291 CGGGGTCTTTCCGTCCCGTGGCGGGTAGACG-GCATCTTCAC-CGTCACTACAATTTCGC 4234 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTA 416 || || || |||||||| | || ||||||| ||||||||||||||||||||||| Sbjct 4233 CGAGCTCACGGCTGAGACAGT-GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTA 4175 Query 417 CCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGC 476 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 4174 CCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGC 4115 Query 477 TTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCA 536 ||| || || || | || | | || ||||||||||||||||| Sbjct 4114 TTCGGTTCAATGCTTC----------TCTTGCGATGACTTCCTCTCTTAACCTTCCAGCA 4065 Query 537 CCGGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||| ||||| || ||||| ||| Sbjct 4064 CCGGGCAGGTGTCAGGCCATATACGTCG 4037 >seq1 Length=2207822 Score = 334 bits (370), Expect = 3e-89 Identities = 416/566 (73%), Gaps = 23/566 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| |||||||||||||||| | ||| ||| | |||| | || |||| || Sbjct 519170 TCGACTTGTCAGTCTCGCAGTCAAGCACGCTTATGCCAATGCACTATCAACACGATTTCC 519111 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| | || | ||||| | | ||||||||||| ||||||||| | ||||||||| Sbjct 519110 GACCGTATTTAGCGTACCTTCGAACTCCTCCGTTACACTTTGGGAGGAGA-CCGCCCCAG 519052 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATA-TCCA 179 | ||||| ||||||| ||||||||||| ||| ||| | ||| |||||||||| || | Sbjct 519051 TCAAACTGCCCACCATACACTGTCCCCATCCCGGATAACGGGACAAGGTTAGAACCTCAA 518992 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 || ||| ||||||||||||| | ||||| | |||||||| | | ||| || Sbjct 518991 ACACAC-CAGGGTGGTATTTCAACGTTGGCTCCATAGAAACTAGCGTCCCTACTTCAAAG 518933 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 ||||||||||||||||||| | | | || ||||| |||||| ||| ||||| | Sbjct 518932 CCTCCCACCTATCCTACACAGATCTGTTCAAAGTCCAATGTAAAGCTACAGTAAAGGTTC 518873 Query 300 C-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 ||||||||| |||| | ||||| | | ||||| | || | | ||| ||| | Sbjct 518872 ATGGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCT 518813 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 | | || ||| ||||||| || ||||||||||||||||||||||||||||||||| Sbjct 518812 GAGTCTCTGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACC 518753 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| Sbjct 518752 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTT 518693 Query 479 CAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACC 538 | || | | || ||| ||| ||| |||| ||||||||||| Sbjct 518692 CGATCAAGAG-CTTGCACCCCA----------TCA--------ATTAATCTTCCAGCACC 518652 Query 539 GGGCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||| || ||||| ||| Sbjct 518651 GGGCAGGCGTCACACCCTATACGTCG 518626 >seq14174 Length=3265 Score = 295 bits (326), Expect = 2e-77 Identities = 411/570 (72%), Gaps = 22/570 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||| |||| | |||| |||||||||| |||| ||| || ||||| | |||||| || Sbjct 2261 TCGAGTTGTCACTCTCACAGTCAAGCTTCCTTATGCCTTTGCACTCTTCGGCTGATTTCC 2202 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||||| |||||| |||||||| |||||||||||||| ||| ||||| | |||||||||| Sbjct 2201 AACCAGCCTGAGGAAACCTTTGTGCGCCTCCGTTACACTTTAGGAGG-CGACCGCCCCAG 2143 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||| |||||| | |||||||| | || ||| | || ||||||| || | Sbjct 2142 TCAAACTGCCCACCTGAAACTGTCCCGATGCCGGATAACGGCTATCGGTTAGAATTCTAG 2083 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAA---CCACTAGCGTGGCCGCATCAT 237 ||||||||||| ||| | ||||||| | |||| || || | |||| Sbjct 2082 CCTTAACAGAGTGGTATCTCACCGTTGACTCCAGCATCCCCACAAGGATGCCT---TCAT 2026 Query 238 AGTCTCCCACCTATCCTACACAA--ACCGCACCGAATGCCAATACCAAGCTATAGTGAAG 295 ||||||||||||||||| | || | || ||||| ||||| ||| |||| ||| ||| Sbjct 2025 AGTCTCCCACCTATCCTGCGCAGTTAAAGC-CCGAAC-CCAATCCCAGGCTACAGTAAAG 1968 Query 296 GTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354 | | |||||||| |||| | || | | | ||||| || | | | |||| Sbjct 1967 CTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGTATCTTCACAGACAATCCTATTT 1908 Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACT 414 | ||| |||| | ||||||||| |||||||||| ||||||| |||||||||| Sbjct 1907 CGCCGAGCCTCTCTCCGAGACAGCATCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACT 1848 Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGG 474 |||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||| Sbjct 1847 TACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGG 1788 Query 475 GCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAG 534 ||||| | | || || | || ||| || | ||||||||||| | Sbjct 1787 GCTTCGGTCGTCAGCTTCGC----------TTGCGCTGACCAACTTCCTTAACCTTCCGG 1738 Query 535 CACCGGGCAGGCGTCAGTCCGTATACCTCG 564 ||| ||||||||||||| || |||| ||| Sbjct 1737 CACTGGGCAGGCGTCAGCCCCCATACATCG 1708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702093568000