Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq11737 370 4e-100
seq1447 370 4e-100
seq13487 367 4e-99
seq10921 343 5e-92
seq1 334 3e-89
seq14174 295 2e-77
>seq11737
Length=277544
Score = 370 bits (410), Expect = 4e-100
Identities = 428/567 (75%), Gaps = 26/567 (5%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
|||||||||| ||||| ||||||||| |||| ||| |||||||| | |||| ||
Sbjct 217148 TCGACTTGTAGGTCTCACAGTCAAGCATCCTTATGCCATTACACTCTACGTACGATTACC 217207
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
| || |||||| ||||||| ||||||| ||| ||| ||||| | ||| ||||||
Sbjct 217208 ATCCGTACTGAGGATACCTTTGAAAGCCTCCGATACTCTTTTGGAGG-CGACCACCCCAG 217266
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180
| ||||||||||||| ||||||||| || | | ||| |||| | |
Sbjct 217267 TCAAACTACCCACCACGCACTGTCCT---------TCTTTGCAGAAG-TTAGGCTCCAAA 217316
Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240
|| || |||||||||||| | ||||||||||| || ||| ||||| |||||||
Sbjct 217317 TAAACAAAGGGTGGTATTTCAAGGATGACTCCACAACGCCTGGCGACGCCGCTTCATAGT 217376
Query 241 CTCCCACCTATCCTACACAAACCGCA-CCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299
||||||||||||||||||| | ||||| | |||||| |||||||||| ||||| |
Sbjct 217377 CTCCCACCTATCCTACACATTATTTATCCGAA-GTCAATACGAAGCTATAGTAAAGGTGC 217435
Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358
| |||||||||||||| | ||| | ||| ||||||| || |||| ||||||||||
Sbjct 217436 ACAGGGTCTTTTCGTCCCACAGCGGGTAACCGGCATCTTCACCGATACTACAATTTCACC 217495
Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417
| || |||||||||||| | || ||||||| ||||||||||||||||||||||||
Sbjct 217496 GAGCTCATGGTTGAGACAGT-GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTAC 217554
Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 217555 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCT 217614
Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537
||| | | || || | || | || | ||| ||||||||||||||||
Sbjct 217615 TCAGTCAAAAGCTTCTC------CGAAGATAACTTCC---TCC-CTTAACCTTCCAGCAC 217664
Query 538 CGGGCAGGCGTCAGTCCGTATACCTCG 564
|||||||| ||||| || ||||| |||
Sbjct 217665 CGGGCAGGTGTCAGGCCATATACGTCG 217691
>seq1447
Length=1029730
Score = 370 bits (410), Expect = 4e-100
Identities = 428/567 (75%), Gaps = 26/567 (5%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
|||||||||| ||||| ||||||||| |||| ||| |||||||| | |||| ||
Sbjct 759225 TCGACTTGTAGGTCTCACAGTCAAGCATCCTTATGCCATTACACTCTACGTACGATTACC 759166
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
| || |||||| ||||||| ||||||| ||| ||| ||||| | ||| ||||||
Sbjct 759165 ATCCGTACTGAGGATACCTTTGAAAGCCTCCGATACTCTTTTGGAGG-CGACCACCCCAG 759107
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180
| ||||||||||||| ||||||||| || | | ||| |||| | |
Sbjct 759106 TCAAACTACCCACCACGCACTGTCCT---------TCTTTGCAGAAG-TTAGGCTCCAAA 759057
Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240
|| || |||||||||||| | ||||||||||| || ||| ||||| |||||||
Sbjct 759056 TAAACAAAGGGTGGTATTTCAAGGATGACTCCACAACGCCTGGCGACGCCGCTTCATAGT 758997
Query 241 CTCCCACCTATCCTACACAAACCGCA-CCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299
||||||||||||||||||| | ||||| | |||||| |||||||||| ||||| |
Sbjct 758996 CTCCCACCTATCCTACACATTATTTATCCGAA-GTCAATACGAAGCTATAGTAAAGGTGC 758938
Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358
| |||||||||||||| | ||| | ||| ||||||| || |||| ||||||||||
Sbjct 758937 ACAGGGTCTTTTCGTCCCACAGCGGGTAACCGGCATCTTCACCGATACTACAATTTCACC 758878
Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417
| || |||||||||||| | || ||||||| ||||||||||||||||||||||||
Sbjct 758877 GAGCTCATGGTTGAGACAGT-GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTAC 758819
Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 758818 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCT 758759
Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537
||| | | || || | || | || | ||| ||||||||||||||||
Sbjct 758758 TCAGTCAAAAGCTTCTC------CGAAGATAACTTCC---TCC-CTTAACCTTCCAGCAC 758709
Query 538 CGGGCAGGCGTCAGTCCGTATACCTCG 564
|||||||| ||||| || ||||| |||
Sbjct 758708 CGGGCAGGTGTCAGGCCATATACGTCG 758682
>seq13487
Length=4875
Score = 367 bits (406), Expect = 4e-99
Identities = 423/566 (75%), Gaps = 25/566 (4%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACT--CACCACCTGATTG 58
||||||||| |||||||||||||||| | ||| ||| || |||| || || |||
Sbjct 3297 TCGACTTGTCAGTCTCGCAGTCAAGCACGCTTATGCCATTGCACTATCAGTAC--GATGT 3240
Query 59 CCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCC 118
|| ||| || || | ||||| | || |||||||||| ||| ||||| | |||||||
Sbjct 3239 CCGACCGTACTTAGCGTACCTTCGAGCTCCTCCGTTACTCTTTAGGAGGAGA-CCGCCCC 3181
Query 119 AGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCC 178
||| ||||| ||||||| |||| |||||| |||||||| ||||| |||||||||| |
Sbjct 3180 AGTCAAACTGCCCACCATGCACGGTCCCCGACCCAGATAATGGGTCAAGGTTAGAACCTC 3121
Query 179 ACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238
| | |||| |||||||||||| | | ||||| | ||| |||| || | ||| |
Sbjct 3120 AAACAGATCAGGGTGGTATTTCAAGGATGGCTCCATGAGAACTGGCGTTCCCACTTCAAA 3061
Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298
| |||||||||||||||||||||||| | || ||||| | |||||| ||| |||||
Sbjct 3060 GCCTCCCACCTATCCTACACAAACCGGTTCAAAGTCCAATGCAAAGCTACAGTAAAGGTT 3001
Query 299 CC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357
| ||||||||| |||| |||||| | | ||||| | || ||| ||| ||| |
Sbjct 3000 CATGGGGTCTTTCCGTCTAGCCGCGGGGAGATTGCATCATCACAAACACTTCAACTTCGC 2941
Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417
| | || || ||||||| || ||||||||||||||||||||||||||||||||
Sbjct 2940 TGAGTCTCAGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTAC 2881
Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||
Sbjct 2880 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACT 2821
Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537
||||| | | || ||| ||| ||| |||| ||||||||||
Sbjct 2820 TCAATCAAGAG-CTTGCACCCCA----------TCA--------TTTAATCTTCCAGCAC 2780
Query 538 CGGGCAGGCGTCAGTCCGTATACCTC 563
||||||||||||| ||| ||||| ||
Sbjct 2779 CGGGCAGGCGTCACTCCCTATACGTC 2754
>seq10921
Length=25804
Score = 343 bits (380), Expect = 5e-92
Identities = 422/568 (74%), Gaps = 29/568 (5%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||||||| ||||||||||||||||||||| ||| || |||||| | | | || ||
Sbjct 4579 TCGACTTGTTTGTCTCGCAGTCAAGCTCCCTTTTGCTATTGCACTCATCGCACGGTTACC 4520
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|| | ||||||| |||||||| ||||||||||| ||| ||||| | ||| ||||||
Sbjct 4519 AAGCGTGCTGAGGAAACCTTTGAAAGCCTCCGTTACTCTTTTGGAGG-CGACCACCCCAG 4461
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180
| ||||||||||||| || ||||||| |||| || |||||| | | |
Sbjct 4460 TCAAACTACCCACCAAGCGGTGTCCCC---------CATG--CCGGGGTTAGGAACCAAA 4412
Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240
|| || ||||||||||||| | || || || || ||| ||||||||| |
Sbjct 4411 TATCAAAAGGGTGGTATTTCAACGTTGGCTAAACGACGCCTGGCGACGCCGCATCAATGC 4352
Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299
||||||||||||||||||| | | | | ||| | |||||||||| ||||| |
Sbjct 4351 CTCCCACCTATCCTACACATCTGATATCCAGTCACAACGCTAAGCTATAGTAAAGGTTCA 4292
Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAA-ACGAGCATCTTTACTCGT-ACTGCAATTTCAC 357
|||||||||| ||||| | ||| | | ||| ||||||| || ||| ||| ||||||| |
Sbjct 4291 CGGGGTCTTTCCGTCCCGTGGCGGGTAGACG-GCATCTTCAC-CGTCACTACAATTTCGC 4234
Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTA 416
|| || || |||||||| | || ||||||| |||||||||||||||||||||||
Sbjct 4233 CGAGCTCACGGCTGAGACAGT-GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTA 4175
Query 417 CCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGC 476
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 4174 CCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGC 4115
Query 477 TTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCA 536
||| || || || | || | | || |||||||||||||||||
Sbjct 4114 TTCGGTTCAATGCTTC----------TCTTGCGATGACTTCCTCTCTTAACCTTCCAGCA 4065
Query 537 CCGGGCAGGCGTCAGTCCGTATACCTCG 564
||||||||| ||||| || ||||| |||
Sbjct 4064 CCGGGCAGGTGTCAGGCCATATACGTCG 4037
>seq1
Length=2207822
Score = 334 bits (370), Expect = 3e-89
Identities = 416/566 (73%), Gaps = 23/566 (4%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||||||| |||||||||||||||| | ||| ||| | |||| | || |||| ||
Sbjct 519170 TCGACTTGTCAGTCTCGCAGTCAAGCACGCTTATGCCAATGCACTATCAACACGATTTCC 519111
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
||| | || | ||||| | | ||||||||||| ||||||||| | |||||||||
Sbjct 519110 GACCGTATTTAGCGTACCTTCGAACTCCTCCGTTACACTTTGGGAGGAGA-CCGCCCCAG 519052
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATA-TCCA 179
| ||||| ||||||| ||||||||||| ||| ||| | ||| |||||||||| || |
Sbjct 519051 TCAAACTGCCCACCATACACTGTCCCCATCCCGGATAACGGGACAAGGTTAGAACCTCAA 518992
Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239
|| ||| ||||||||||||| | ||||| | |||||||| | | ||| ||
Sbjct 518991 ACACAC-CAGGGTGGTATTTCAACGTTGGCTCCATAGAAACTAGCGTCCCTACTTCAAAG 518933
Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299
||||||||||||||||||| | | | || ||||| |||||| ||| ||||| |
Sbjct 518932 CCTCCCACCTATCCTACACAGATCTGTTCAAAGTCCAATGTAAAGCTACAGTAAAGGTTC 518873
Query 300 C-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358
||||||||| |||| | ||||| | | ||||| | || | | ||| ||| |
Sbjct 518872 ATGGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCT 518813
Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418
| | || ||| ||||||| || |||||||||||||||||||||||||||||||||
Sbjct 518812 GAGTCTCTGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACC 518753
Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||
Sbjct 518752 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTT 518693
Query 479 CAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACC 538
| || | | || ||| ||| ||| |||| |||||||||||
Sbjct 518692 CGATCAAGAG-CTTGCACCCCA----------TCA--------ATTAATCTTCCAGCACC 518652
Query 539 GGGCAGGCGTCAGTCCGTATACCTCG 564
|||||||||||| || ||||| |||
Sbjct 518651 GGGCAGGCGTCACACCCTATACGTCG 518626
>seq14174
Length=3265
Score = 295 bits (326), Expect = 2e-77
Identities = 411/570 (72%), Gaps = 22/570 (4%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
|||| |||| | |||| |||||||||| |||| ||| || ||||| | |||||| ||
Sbjct 2261 TCGAGTTGTCACTCTCACAGTCAAGCTTCCTTATGCCTTTGCACTCTTCGGCTGATTTCC 2202
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|||||| |||||| |||||||| |||||||||||||| ||| ||||| | ||||||||||
Sbjct 2201 AACCAGCCTGAGGAAACCTTTGTGCGCCTCCGTTACACTTTAGGAGG-CGACCGCCCCAG 2143
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180
| ||||| |||||| | |||||||| | || ||| | || ||||||| || |
Sbjct 2142 TCAAACTGCCCACCTGAAACTGTCCCGATGCCGGATAACGGCTATCGGTTAGAATTCTAG 2083
Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAA---CCACTAGCGTGGCCGCATCAT 237
||||||||||| ||| | ||||||| | |||| || || | ||||
Sbjct 2082 CCTTAACAGAGTGGTATCTCACCGTTGACTCCAGCATCCCCACAAGGATGCCT---TCAT 2026
Query 238 AGTCTCCCACCTATCCTACACAA--ACCGCACCGAATGCCAATACCAAGCTATAGTGAAG 295
||||||||||||||||| | || | || ||||| ||||| ||| |||| ||| |||
Sbjct 2025 AGTCTCCCACCTATCCTGCGCAGTTAAAGC-CCGAAC-CCAATCCCAGGCTACAGTAAAG 1968
Query 296 GTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354
| | |||||||| |||| | || | | | ||||| || | | | ||||
Sbjct 1967 CTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGTATCTTCACAGACAATCCTATTT 1908
Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACT 414
| ||| |||| | ||||||||| |||||||||| ||||||| ||||||||||
Sbjct 1907 CGCCGAGCCTCTCTCCGAGACAGCATCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACT 1848
Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGG 474
|||||||||||||||||||||||||||||| ||||||||||| |||||||| || |||
Sbjct 1847 TACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGG 1788
Query 475 GCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAG 534
||||| | | || || | || ||| || | ||||||||||| |
Sbjct 1787 GCTTCGGTCGTCAGCTTCGC----------TTGCGCTGACCAACTTCCTTAACCTTCCGG 1738
Query 535 CACCGGGCAGGCGTCAGTCCGTATACCTCG 564
||| ||||||||||||| || |||| |||
Sbjct 1737 CACTGGGCAGGCGTCAGCCCCCATACATCG 1708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702093568000
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