Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_031919.1 Length=42696 Score E Sequences producing significant alignments: (Bits) Value seq1447 80.6 7e-11 >seq1447 Length=1029730 Score = 80.6 bits (88), Expect = 7e-11 Identities = 124/177 (70%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 26704 AAAAAGAGACGTTGCAATTGAAACGGATGAACAATATCCGCAAAAAATATTGATAGAATT 26763 ||||||||| || | | | || | || |||||||| ||| |||| ||| ||||||| Sbjct 297540 AAAAAGAGAAGTGGTACTGATGACCCAAGAGCAATATCCTCAACAAATCTTGGTAGAATT 297481 Query 26764 CACGCAAGACAAATGCGATTTATTAAATAATTACAAACTTGATGATGTTGTAAAAATTGC 26823 || ||||||||| ||||||||||| |||||| ||| | || ||||| | Sbjct 297480 TACCCAAGACAAAGTGGATTTATTAAACAATTACGCTGAGGATCAGAACGTGAAAATCTC 297421 Query 26824 AATCAACATCAACGGTCGTGAATGGATCAATCCGCAAGGCGaaaaaaaaTATTTCAA 26880 |||||||| | || | |||||||| ||||| | |||| ||||| ||||| Sbjct 297420 CATCAACATTAGAGGAAGAGAATGGATTAATCCAGAGGGCGTGGCCAAATACTTCAA 297364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136476421928000