Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq8604 315 1e-83 seq139688 206 4e-51 >seq8604 Length=7606 Score = 315 bits (348), Expect = 1e-83 Identities = 227/257 (88%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 3187 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 3244 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||||||| |||| |||||||||| ||||||||| |||||| || ||||||| |||| Sbjct 3245 CTCGTTGAAGTCCAATAATTGCAATGGACTATCCCCAGCACGATCAAGTTTCAAAAGATT 3304 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||| || ||||||||| | |||||||||||||||||||| Sbjct 3305 ACCCAGACCTTCCGGCCAAGGTTGTAAACTCGTTGACTTGATCAGTGTAGCGCGCGTGCG 3364 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239 ||||||||||||||||||||||||||||||||||||||||||||||||| | | |||| | Sbjct 3365 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGACTAATA 3424 Query 240 GGCCAT-CTCCCTCGAA 255 | | || |||||| || Sbjct 3425 GTCAATAGTCCCTCTAA 3441 >seq139688 Length=629 Score = 206 bits (228), Expect = 4e-51 Identities = 181/221 (82%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 153 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 210 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| ||| || |||| |||| ||||||| ||||||| ||| |||| | || Sbjct 211 CTCGTTCAAGGGGAATAATTACAATCCCCTATCCCAATCACGAAGAAGGTTCACTGGGTT 270 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACT---CGTTGAATACATCAGTGTAGCGCGCGT 176 |||||| | || | | | |||| | | | | || ||| || |||||||||||||||| Sbjct 271 ACCCGGTCGTGGCCGACCAGGTCACACAATGCACGCTGATCACTTCAGTGTAGCGCGCGT 330 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||||||| | ||||||||||||||||||||||||||||||| Sbjct 331 GCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750976829035