Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq139678 102 8e-20 >seq139678 Length=316 Score = 102 bits (112), Expect = 8e-20 Identities = 137/187 (73%), Gaps = 9/187 (5%) Strand=Plus/Minus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61 ||| | ||||||||||| ||| | |||||| ||||||||| || ||||| |||| Sbjct 230 GCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGC 171 Query 62 TACGGGGATTG-GCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATA 120 | |||||| || ||| | || |||||||| |||| ||||||||||||||||| | Sbjct 170 TGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGCAACCCACCCTT 111 Query 121 TTGGAGATATATCATAACG-----CTAGG--CGTTAGGCGAACGTGGGGAACTGAAACAT 173 || | | ||| |||| | |||| | ||||||||| || |||||||||||| Sbjct 110 TTAG-GGTATTGCATACTGAATACATAGGTATGCAAGGCGAACGCGGCGAACTGAAACAT 52 Query 174 CTAAGTA 180 ||||||| Sbjct 51 CTAAGTA 45 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476151266069