Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq8604 342 8e-92 seq139688 232 1e-58 >seq8604 Length=7606 Score = 342 bits (378), Expect = 8e-92 Identities = 230/257 (89%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3332 ACTCGTTGACTTGATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3391 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||||| || || ||||||||||||||||||| | Sbjct 3392 CCTGTTATTGCCTCAAACTTCCATTGACTAATAGTCAATAGTCCCTCTAAGAAGTTGACG 3451 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||||| | || | |||||||||||||||||||||||||||||| ||||||||| Sbjct 3452 ACCAACAAACGTTGGCCTAACTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAA 3511 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3512 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 3571 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 3572 AGAGCTCTCAATCTGTC 3588 >seq139688 Length=629 Score = 232 bits (256), Expect = 1e-58 Identities = 204/249 (82%), Gaps = 9/249 (4%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || Sbjct 315 TCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 373 Query 76 AAACTTCCATTGGCTGGAA-GCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-----A 129 ||| ||||| | ||| ||||||||||||||| ||| || | Sbjct 374 TGT-TTCGTGCGGCTGAACCGCCGCCTGTCCCTCTAAGAAGCG-GCCGGTGACGTGTTTA 431 Query 130 TAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189 | | | || |||||||| ||| || ||||||||||||||||||||||||||||||| Sbjct 432 AAAGCCACCGGTCTATTTAGTAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAA 491 Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct 492 ATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACTGAATCAAGAAAGAGCTCT 551 Query 250 CAATCTGTC 258 ||||||||| Sbjct 552 CAATCTGTC 560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795715874169