Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq8604 459 5e-127 seq140331 280 3e-73 seq139782 75.2 2e-11 >seq8604 Length=7606 Score = 459 bits (508), Expect = 5e-127 Identities = 280/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| |||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 6973 TACTAAGTTCAATTACTATTGCAACAACATTTCATCAGTAGGGTAAAACTAACCTGTCTC 7032 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 7033 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 7092 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7093 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 7152 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7153 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 7212 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7213 TGAAATTTCCAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 7268 >seq140331 Length=205 Score = 280 bits (310), Expect = 3e-73 Identities = 184/202 (91%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 73 CCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGG 132 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1 CCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGC 60 Query 133 TATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCT 192 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 61 AATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCC 120 Query 193 GCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA-- 250 ||||||||||||||||||||||||||||||||||| ||||||| || | ||| | | | Sbjct 121 GCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTTAAAACTCCTAAC 180 Query 251 GGGACTAAAGGATCGATAGGCC 272 ||| |||||||||||||||| Sbjct 181 AAGACAAAAGGATCGATAGGCC 202 >seq139782 Length=254 Score = 75.2 bits (82), Expect = 2e-11 Identities = 43/44 (98%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAAC 73 ||||||||||||||||||||||||||||||| |||||||||||| Sbjct 211 GTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAAC 254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853200003744