Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq114784 75.2 3e-11 >seq114784 Length=252 Score = 75.2 bits (82), Expect = 3e-11 Identities = 138/195 (71%), Gaps = 7/195 (4%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| |||||||||||| | || ||| | Sbjct 194 CGACTACGCCTCTCGGCCTCGCCTTAGGGGTCGACTCACCCAGCCCCGATTAACGTTGGA 135 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCA--CACGCTACTCATGCC 118 ||||||||||||| || ||| || | || ||| || || || |||||| | | Sbjct 134 CTGGAACCCTTGGTCTTTCAGCGTGCGAGTTTTTCACTCG-CATTGTCGTTACTCACGTC 76 Query 119 TGCATTCTCAC-TCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCA-CCACTGACA 176 |||||| ||| || || | ||||| || || || | || ||||| | || ||| Sbjct 75 AGCATTCGCACTTCTGAT-ACCTCCAGCATAC-TTCTCAATACACCTTCATCGGCTTACA 18 Query 177 CGACGCTCCCCTACC 191 ||||||||||||| Sbjct 17 GAACGCTCCCCTACC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1175946072576