Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq8604 241 1e-61 seq139725 118 1e-24 >seq8604 Length=7606 Score = 241 bits (266), Expect = 1e-61 Identities = 169/190 (89%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||||||||||||||||||| ||| ||||||||| || ||| ||||| Sbjct 4085 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCATTCGCTTGAATA 4026 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | ||||||||||||| |||||||||||||| Sbjct 4025 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTCTATTTTGTTGGTTTCTAGGACCG- 3968 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| |||||||| ||||||||||| Sbjct 3967 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTC 3908 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 3907 TTGGATTTAT 3898 >seq139725 Length=593 Score = 118 bits (130), Expect = 1e-24 Identities = 136/182 (75%), Gaps = 7/182 (4%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT------GCTCGAATACAT 63 || ||||||||||||||||||||| | ||||||||||| ||| || |||||| Sbjct 429 ACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCGTTTCCCATCGCCCGAATAATG 370 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 | ||||||||||| ||||||||| | |||||||||||||| ||| | | ||| | Sbjct 369 TTGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTCTTCGGAACCCGAGG 311 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| || | ||| || |||||| | ||||| | | |||||||||||||| Sbjct 310 TAATGATTAAGAGGGACAGACGGGGGCATTCGTATTGCGGCGCTAGAGGTGAAATTCTTG 251 Query 184 GA 185 || Sbjct 250 GA 249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511303372960