Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq7622 205 2e-50 >seq7622 Length=2935 Score = 205 bits (226), Expect = 2e-50 Identities = 246/327 (75%), Gaps = 8/327 (2%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGC-CGAGTGATTC 69 ||||| |||||| |||||||||| ||| | |||||||| ||| |||| ||| | | | Sbjct 1430 AGGGGAGTGAAAGAGACCCTGAAACCGTGTGCCTACAAATAGTCAGAGCACGA-TAAATG 1372 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||| ||||||||||||| | ||||| || ||||||| || || || |||||||| Sbjct 1371 TGTGATGGCGTGCCTTTTGTAGAATGAACCGGCGAGTTACG-GTTACATGCAAGGTTAAG 1313 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGA--GTTGGTGG 187 | || | |||||||| |||| |||| ||||| ||||||| || || |||| Sbjct 1312 --CAGAAGATGTGG-AGCCGAAGGGAAACCGAGTCTTAATAGGGCGAAGAAAGTATGTGG 1256 Query 188 CGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGA 247 | ||||| ||||||| ||||| ||| ||| ||||||||||||| ||||| | Sbjct 1255 CTGTAGACCCGAAACCGTGTGAGCTAGCCATGAGCAGGTTGAAGCGTAGGTAAAACTACG 1196 Query 248 TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAA 307 |||||||||||||| || |||||||||||| | |||||||| | || ||||||||||| Sbjct 1195 TGGAGGACCGAACCAGTGTACGTTGAAAAGTGCTTGGATGACTTGTGGCTAGGGGTGAAA 1136 Query 308 GGCCAATCAAACTGGGAAATAGCTCGT 334 |||||| ||| ||| |||||| || Sbjct 1135 TTCCAATCGAACACGGATATAGCTGGT 1109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972645363712