Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq15676 266 8e-69 >seq15676 Length=1149 Score = 266 bits (294), Expect = 8e-69 Identities = 249/317 (79%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 21 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTA 80 |||||||||||||||||||||||||||||||||||||| | ||||||| |||||||| Sbjct 537 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTATCCGGAATTA 596 Query 81 CTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAAC 140 ||||||||||| | ||||||| |||| |||| | | |||||||| | ||||||| Sbjct 597 TTGGGCGTAAAGGGCGCGCAGGTGGTTAGATAAGTCTGATGTGAAATTTTTGTGCTTAAC 656 Query 141 CTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACG 200 || |||| | |||| ||| ||| | ||||| |||||||||| | Sbjct 657 GCAAAAAGGTCATTGGAAACTGTCTAACTTGAGAGCAGGAGAGGTAAGTGGAATTCCTAG 716 Query 201 TGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGG 260 |||||| ||||||||||||||||| |||||||||||| |||||||||| || |||| Sbjct 717 TGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTACTGGA 776 Query 261 ATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 320 | ||||| || | | |||||||||||| ||||||||||||||||||||||||||| Sbjct 777 CTGCATCTGACACTGAGGTGCGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAG 836 Query 321 TCCACGCCCTAAACGAT 337 |||||||| |||||||| Sbjct 837 TCCACGCCGTAAACGAT 853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289395005184