Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq7622 93.3 4e-17 >seq7622 Length=2935 Score = 93.3 bits (102), Expect = 4e-17 Identities = 117/158 (74%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 31 ACACACGTAGTCGGGTTGAATAT-ACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTA 89 ||||| |||||||||| || | || |||| | ||| ||| | ||||||||||| Sbjct 283 ACACAGGTAGTCGGGTGTAAGAACACCAAGGTGAGCGAGAGAACTATTGTTAAGGAACTC 224 Query 90 GGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGGCGCAG 149 |||||| ||||| ||||||||||||||| ||| |||| |||| | ||||| Sbjct 223 GGCAAAAAGACCCCGTAACTTCGGGATAAGGGGAGGTTACC----GATGGTAACCCGCAG 168 Query 150 AGAA-TAGGTCCAGGCAACTGTTTAACAAAAACACAGG 186 | || || |||||| |||||||| |||||||||||| Sbjct 167 AAAATTAATCCCAGGCGACTGTTTATCAAAAACACAGG 130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531118199184