Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq15692 176 1e-41 seq7622 118 3e-24 >seq15692 Length=1203 Score = 176 bits (194), Expect = 1e-41 Identities = 130/152 (86%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || |||||||||||||| | | ||||||| |||||| || |||||||| Sbjct 152 CGCGGGTAACCTGCATCTTCACAGGTACTATGATTTCACCGAGTCTATTGTTGAGACAGC 93 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 || |||||||| || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 92 TCCCAGATCGTTACACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 33 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTAC 152 ||||||||||||| |||||||||||||||||| Sbjct 32 TTAGGACCGTTATAGTTACGGCCGCCGTTTAC 1 >seq7622 Length=2935 Score = 118 bits (130), Expect = 3e-24 Identities = 202/290 (70%), Gaps = 31/290 (11%) Strand=Plus/Plus Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGC---TAAC 186 |||| |||||||||||||||||| |||||||| | | |||||| | | | |||| Sbjct 1 TTATAGTTACGGCCGCCGTTTACTGGGGCTTCAACTTAATGCTTCGACTAATCGTCTAAC 60 Query 187 --CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGT 244 | |||| |||||||||| |||| |||||||||||| ||||||| || ||| || Sbjct 61 ATCTCATC--TTAACCTTCCAGCACTGGGCAGGCGTCAGCGCCTATACTTCACCTTACGG 118 Query 245 GTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCA 304 |||||||| |||||||||| |||||||||||| || | || ||| | || Sbjct 119 TTTTGCAGACACCTGTGTTTTTGATAAACAGTCGCCTGGGATT--AATTTTCTGCGGG-- 174 Query 305 TGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGC 364 |||| || || | || | | |||| |||||||||||||| | Sbjct 175 -----TTAC----CA--TCGGTAAC---------CTCCCCTTATCCCGAAGTTACGGGGT 214 Query 365 CTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCT 414 ||||||||| |||||||| | ||||||||| | ||||||| |||| Sbjct 215 CTTTTTGCCGAGTTCCTTAACAATAGTTCTCTCGCTCACCTTGGTGTTCT 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260599583232