Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq7622 239 1e-60 seq15692 214 4e-53 >seq7622 Length=2935 Score = 239 bits (264), Expect = 1e-60 Identities = 201/245 (82%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 124 TTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTC---TAAC 180 ||||||||||||||||||||||||||||||| | | | |||||||| | || |||| Sbjct 1 TTATAGTTACGGCCGCCGTTTACTGGGGCTTCAACTTAATGCTTCGACTAATCGTCTAAC 60 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | || |||||||||||||||| |||||||||||||| ||||||| || ||| || | Sbjct 61 ATCTCATCTTAACCTTCCAGCACTGGGCAGGCGTCAGCGCCTATACTTCACCTTACGGTT 120 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCT-ATTCTCTGCGGCCTGTCA 299 | ||||| ||||||||||||| ||||||||||| |||| | ||| ||||||| | || Sbjct 121 TTGCAGACACCTGTGTTTTTGATAAACAGTCGCCTGGGATTAATTTTCTGCGGGTTACCA 180 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAG 359 | | | | |||||| |||| ||||||||||||| |||||||||||||||||||||||| Sbjct 181 TCGGTAACCTCCCCTTATCCCGAAGTTACGGGGTCTTTTTGCCGAGTTCCTTAACAATAG 240 Query 360 TTCTC 364 ||||| Sbjct 241 TTCTC 245 >seq15692 Length=1203 Score = 214 bits (236), Expect = 4e-53 Identities = 135/146 (92%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 || || |||||||||| || | || ||||||||||||||||||||||||||| |||| Sbjct 146 TAACCTGCATCTTCACAGGTACTATGATTTCACCGAGTCTATTGTTGAGACAGCTCCCAG 87 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 86 ATCGTTACACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 27 Query 121 CCGTTATAGTTACGGCCGCCGTTTAC 146 |||||||||||||||||||||||||| Sbjct 26 CCGTTATAGTTACGGCCGCCGTTTAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062231120896