Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq15676 282 1e-73 seq14315 138 3e-30 >seq15676 Length=1149 Score = 282 bits (312), Expect = 1e-73 Identities = 204/231 (88%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 921 TACGATCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 980 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT-CCTCTGACCCCT 119 |||||||||||||||||||||||||||||||||||| ||||||| || ||| | Sbjct 981 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGGTTTGACATACCAATGAAACAA 1040 Query 120 CTAGAGATAGAGGTTTCC-CCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 |||||||| || || |||||||| | | | ||||||| ||||||||||||||| Sbjct 1041 TTAGAGATA---ATTGCCTCCTTCGGGACATTG-GATACAGGTGGTGCATGGTTGTCGTC 1096 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTA 229 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1097 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTA 1147 >seq14315 Length=354 Score = 138 bits (152), Expect = 3e-30 Identities = 85/91 (93%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 406 TCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGT 465 ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct 1 TCTCAGTTCGGATTGTAGTCTGCAACTCGACTACATGAAGATGGAATCGCTAGTAATCGC 60 Query 466 AGATCAGCATGCTACGGTGAATACGTTCCCG 496 ||||||||||| ||||||||||||||||| Sbjct 61 GGATCAGCATGCCGCGGTGAATACGTTCCCG 91 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503760924160