Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq15692 260 3e-67 >seq15692 Length=1203 Score = 260 bits (288), Expect = 3e-67 Identities = 236/296 (80%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 44 GGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAACCGGACGACGTATAAC 103 |||| | | | ||||||||||||| | | ||| || ||||||| | | | || | Sbjct 260 GGAGTCACAGGTGGGATACTACCCTTATGTTATGGGTATTCTAACGTGGTATCAT-TATC 318 Query 104 CGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAA 163 | | ||||| |||| | || ||||||||||||||||||||||||| ||||||||| Sbjct 319 TGGTACACGGACAATGTCTGGTGGACAGTTTGACTGGGGCGGTCGCCTCCTAAAGAGTAA 378 Query 164 CGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAA 223 ||||||||||||||| | |||||| ||| |||||| ||||| | |||| ||||||| Sbjct 379 CGGAGGCGCCCAAAGGTTTTCTCAGCATGGTTGGAAATCATGCATAGAGTGTAAAGGCAT 438 Query 224 AAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATC 283 ||| | |||||||||| || || ||| ||||||||||||||||||||||| ||||| Sbjct 439 AAGAAAGCTTGACTGCGAGACGTACATGTCGAGCAGGGACGAAAGTCGGGCTTAGTGATC 498 Query 284 CGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||||||| | |||||||| ||||||||||| ||||||||||||||||| ||||||| Sbjct 499 CGGCGGTACCGAATGGAAGGGCCGTCGCTCAACGGATAAAAGCTACCCCGGGGATA 554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982243837696