Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq15676 232 1e-58 >seq15676 Length=1149 Score = 232 bits (256), Expect = 1e-58 Identities = 171/197 (87%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 |||||| |||||| | | |||| ||| |||||||||||| ||| |||||||||||||||| Sbjct 465 TTTACATTCCGAAAAACGTCTT-CACTCACGCGGCATTG-CTGCATCAGGCTTTCGCCCA 408 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||| ||| |||||| ||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 407 TTGTGCAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 348 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| | | ||| |||||||| || | ||| |||||||||||||||| || ||||| ||| Sbjct 347 GTGGCCGGTCAACCTCTCAGTCCGGCTACCGATCGTCGCCTTGGTGCGCTCTTACCACAC 288 Query 182 CAACTAGCTAATCCGAC 198 ||||||||||||| ||| Sbjct 287 CAACTAGCTAATCAGAC 271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071829594880