Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq7622 264 4e-68 >seq7622 Length=2935 Score = 264 bits (292), Expect = 4e-68 Identities = 339/465 (73%), Gaps = 28/465 (6%) Strand=Plus/Plus Query 143 CCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTAT 202 |||||| ||||||| ||||||||||||| | ||| |||||| ||||||||||| Sbjct 1088 CCTAAAGCTATTTCGGAGAGAACCAGCTATATCCGTGTTCGATTGGAATTTCACCCCTAG 1147 Query 203 CCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACC 262 ||||| ||||||| || |||||||| || |||||||||||||||| || ||||| Sbjct 1148 CCACAAGTCATCCAAGCACTTTTCAACGTACACTGGTTCGGTCCTCCACGTAGTTTTACC 1207 Query 263 CGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCAC---- 318 ||||||||||||| ||||| ||| |||| | ||||||||| | ||||| Sbjct 1208 TACGCTTCAACCTGCTCATGGCTAGCTCACACGGTTTCGGGTCTACA----GCCACATAC 1263 Query 319 -TCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACA----CGGGTTAACCT 373 | | ||||||||| |||||| |||| || ||||| ||||| | | ||||||| Sbjct 1264 TTTCTTCGCCCTATTAAGACTCGGTTTCCCTTCGGCT---CCACATCTTCTGCTTAACCT 1320 Query 374 CGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCT 433 || | ||| ||||||| || ||||||| ||||||||||||| |||| || | Sbjct 1321 TGC-ATGTAACCGTAACTCGCCGGTTCATTCTACAAAAGGCACGCCATCAC-----ACAT 1374 Query 434 AAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCC 493 | | |||| ||| ||||||||||| ||||||||| || |||||||||| Sbjct 1375 TTA------TCGTGCTCTGACTATTTGTAGGCACACGGTTTCAGGGTCTCTTTCACTCCC 1428 Query 494 CGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAG 553 | | ||||| ||||||||||||||||||||||||| || | ||||||||||| | || Sbjct 1429 CTTCCGGGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCACTAGTTAG 1488 Query 554 TATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598 ||||| | ||| | |||||| || | |||| || ||||| Sbjct 1489 TATTTTGCCTTGGGAGATGGTCCTCCCTGCTTCAAACAGGATTTC 1533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817311074304