Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq7622 223 9e-56 >seq7622 Length=2935 Score = 223 bits (246), Expect = 9e-56 Identities = 294/393 (75%), Gaps = 11/393 (3%) Strand=Plus/Plus Query 30 TTTTCAACGGTAGTC-GGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCC 88 ||||||||| || | |||||||||||||| |||| ||||| | ||| |||||||| Sbjct 1167 TTTTCAACG-TACACTGGTTCGGTCCTCCACGTAGTT-TTACCTACGCTT-CAACCTGCT 1223 Query 89 CATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCC-CAGCGACTAGACGCCCTAGTAAG 147 ||| || ||| || | |||||| |||||||| || || | ||||||| |||| Sbjct 1224 CAT-GGCTAGCTCACACGGTTT-CGGGTCTACAGCCACATACTTTCTTCGCCCTATTAAG 1281 Query 148 ACTCGCTTTTCGCTACGCCTCCCC-TATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGC 206 ||||| ||| | || || |||| | | ||| | | | | |||| | | ||| |||| Sbjct 1282 ACTCGGTTTCC-CTTCGGCTCCACATCTTCTGCTTAACCTTGCATGTAACCGTAACTCGC 1340 Query 207 TGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACG 266 | |||| ||||||||| |||| |||| || | | |||| ||| ||||| | Sbjct 1341 CGGTTCATTCTACAAAAGGCACGCCATCACACATTTATC-GTGCTCTGACTATTTGTAGG 1399 Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326 || ||||||||||| ||| |||||||||||| ||||||||||||||| |||||||||||| Sbjct 1400 CACACGGTTTCAGGGTCTCTTTCACTCCCCT-TCCGGGGTTCTTTTCACCTTTCCCTCAC 1458 Query 327 GGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATA 386 |||||| ||||||||||||||| | |||||||| ||||||| |||||||| ||| Sbjct 1459 GGTACTGGTTCACTATCGGTCACTAGTTAGTATTTTGCCTTGGGAGATGGTCCTCCCTGC 1518 Query 387 TTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||| ||| ||||||||| | | ||||||| Sbjct 1519 TTCAAACAGGATTTCTCGTGTCCTGCCCTACTC 1551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241402635264