Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq15676 239 9e-61 >seq15676 Length=1149 Score = 239 bits (264), Expect = 9e-61 Identities = 241/311 (77%), Gaps = 23/311 (7%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||||||||||| |||| |||||||||||| || ||| ||||||||||||||||| Sbjct 434 GGCATTGCTGCATCAGGCTTTCGCCCATTGTGCAAGATTCCCTACTGCTGCCTCCCGTAG 375 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 374 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCAACCTCTCAGTCCGGCTACCGAT 315 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| ||||||| ||| ||| | ||||||||| |||||| | ||| || || ||| || Sbjct 314 CGTCGCCTTGGTGCGCTCTTACCACACCAACTAGCTAATCAGACGC-AGTCC--CTTCCA 258 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACA-------TTATGCGGTATT 233 | | | |||| || || |||| | | | |||| ||||||| Sbjct 257 TTGGTGGAGCTTT---------TTG--GC--TCCTTTTAAATTGCTTCTTATCCGGTATT 211 Query 234 AGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACC 293 ||| |||||||||||| ||| | ||| || | ||||| |||||||||||||| Sbjct 210 AGCTTTCGTTTCCAAAAGTTGTCCCAGTCCTTTGGTTAGGTTAACTACGTGTTACTCACC 151 Query 294 CGTCCGCCACT 304 ||| ||||||| Sbjct 150 CGTTCGCCACT 140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998241294336